mzPeak

mzPeak example data — s3://v09 ​

Public-read example datasets for the mzML2mzPeak project (originals + converted mzPeak).

📈 General MS Data — general-ms/ (42 datasets, 393 files, 68.5 GB) ​

Provenance. Openly published runs from PRIDE, MetaboLights, MassIVE and Zenodo spanning 6 vendors and the major analyzer classes — Orbitrap, Q-TOF / UHR-QTOF, FT-ICR, pure ion trap, triple-quad (SRM/MRM), QqLIT, TIMS & DTIMS ion mobility, DIA, and GC electron-ionization. Each dataset below names its accession and source publication.

Browse: https://object.storage.eu01.onstackit.cloud/v09/general-ms.html

general-ms/MSV000084273 ​

MassIVE · Bruker micrOTOF II — secreted-proteins metabolomics, native vendor raw .d (BAF). Broad-vendor demonstrator (raw only; one representative run).

filesizedownloadviewer
DK-100119 BD_1079-C_Hil_RB2_01_12082.d/12082.m/DataAnalysis.Method7.7 KBlink
DK-100119 BD_1079-C_Hil_RB2_01_12082.d/12082.m/desktop.ini171 Blink
DK-100119 BD_1079-C_Hil_RB2_01_12082.d/12082.m/hystar.method7.6 KBlink
DK-100119 BD_1079-C_Hil_RB2_01_12082.d/12082.m/lock.file0 Blink
DK-100119 BD_1079-C_Hil_RB2_01_12082.d/12082.m/microTOFQAcquisition.method80.9 KBlink
DK-100119 BD_1079-C_Hil_RB2_01_12082.d/12082.m/submethods.xml840 Blink
DK-100119 BD_1079-C_Hil_RB2_01_12082.d/analysis.0.DataAnalysis.method7.7 KBlink
DK-100119 BD_1079-C_Hil_RB2_01_12082.d/analysis.0.result_c366.7 KBlink
DK-100119 BD_1079-C_Hil_RB2_01_12082.d/analysis.baf532.9 MBlink

general-ms/MSV000090203 ​

MassIVE · Agilent 6560 Q-TOF — lipidomics, native vendor raw .d (MassHunter). Broad-vendor demonstrator (raw only; one representative run).

filesizedownloadviewer
FM_01_Pos.mzpeak1.0 GBlink▶ View
FM_01_Pos.d/AcqData/200925_Lipids_Pos_Ramp.m/191_1.stg9.0 KBlink
FM_01_Pos.d/AcqData/200925_Lipids_Pos_Ramp.m/BinPump_1.xml20.8 KBlink
FM_01_Pos.d/AcqData/200925_Lipids_Pos_Ramp.m/DaMethod/Qual/info.xml201 Blink
FM_01_Pos.d/AcqData/200925_Lipids_Pos_Ramp.m/DaMethod/Qual/method.xml494 Blink
FM_01_Pos.d/AcqData/200925_Lipids_Pos_Ramp.m/DaMethod/Quant/info.xml201 Blink
FM_01_Pos.d/AcqData/200925_Lipids_Pos_Ramp.m/DaMethod/Quant/method.xml519 Blink
FM_01_Pos.d/AcqData/200925_Lipids_Pos_Ramp.m/HiP-ALS_1.xml7.1 KBlink
FM_01_Pos.d/AcqData/200925_Lipids_Pos_Ramp.m/HiP-ALS_1_MethodMetaData.xml188 Blink
FM_01_Pos.d/AcqData/200925_Lipids_Pos_Ramp.m/HiP-ALS_1_Pretreatment.xml5.7 KBlink
FM_01_Pos.d/AcqData/200925_Lipids_Pos_Ramp.m/info.xml594 Blink
FM_01_Pos.d/AcqData/200925_Lipids_Pos_Ramp.m/TCC_1.xml4.1 KBlink
FM_01_Pos.d/AcqData/AcqMethod.xml135.3 KBlink
FM_01_Pos.d/AcqData/BinPump1.cd611 Blink
FM_01_Pos.d/AcqData/BinPump1.cg2.1 MBlink
FM_01_Pos.d/AcqData/Contents.xml1.3 KBlink
FM_01_Pos.d/AcqData/DefaultMassCal.xml2.7 KBlink
FM_01_Pos.d/AcqData/DeviceConfigInfo.xml11.4 KBlink
FM_01_Pos.d/AcqData/Devices.xml1.3 KBlink
FM_01_Pos.d/AcqData/HiP-ALS1.cd171 Blink
FM_01_Pos.d/AcqData/HiP-ALS1.cg178.2 KBlink
FM_01_Pos.d/AcqData/IMSFrame.bin144.9 KBlink
FM_01_Pos.d/AcqData/IMSFrame.xsd2.4 KBlink
FM_01_Pos.d/AcqData/IMSFrameMeth.xml3.7 KBlink
FM_01_Pos.d/AcqData/MSActualDefs.xml33.0 KBlink
FM_01_Pos.d/AcqData/MSPeak.bin48.8 MBlink
FM_01_Pos.d/AcqData/MSPeriodicActuals.bin65.2 KBlink
FM_01_Pos.d/AcqData/MSProfile.bin1.1 GBlink
FM_01_Pos.d/AcqData/MSScan.bin103.8 MBlink
FM_01_Pos.d/AcqData/MSScan.xsd2.4 KBlink
FM_01_Pos.d/AcqData/MSTS.xml472 Blink
FM_01_Pos.d/AcqData/OverrideImsCal.xml330 Blink
FM_01_Pos.d/AcqData/sample_info.xml7.3 KBlink
FM_01_Pos.d/AcqData/TCC1.cd273 Blink
FM_01_Pos.d/AcqData/TCC1.cg35.7 KBlink
FM_01_Pos.d/desktop.ini80 Blink

general-ms/MSV000092457 ​

MassIVE · Bruker timsTOF Pro 2 — metabolome, native vendor raw .d (TDF). Broad-vendor demonstrator (raw only; one representative run).

filesizedownloadviewer
DIrwin_spleen_macrophages_aged_b-thal_3133_S2-F12_1_13373.mzpeak1.4 GBlink▶ View
_t19.log0 Blink
DIrwin_spleen_macrophages_aged_b-thal_3133_S2-F12_1_13373.d/13373.m/desktop.ini156 Blink
DIrwin_spleen_macrophages_aged_b-thal_3133_S2-F12_1_13373.d/13373.m/hystar.method6.7 KBlink
DIrwin_spleen_macrophages_aged_b-thal_3133_S2-F12_1_13373.d/13373.m/lock.file0 Blink
DIrwin_spleen_macrophages_aged_b-thal_3133_S2-F12_1_13373.d/13373.m/microTOFQImpacTemAcquisition.method127.5 KBlink
DIrwin_spleen_macrophages_aged_b-thal_3133_S2-F12_1_13373.d/13373.m/submethods.xml639 Blink
DIrwin_spleen_macrophages_aged_b-thal_3133_S2-F12_1_13373.d/analysis.tdf65.3 MBlink
DIrwin_spleen_macrophages_aged_b-thal_3133_S2-F12_1_13373.d/analysis.tdf_bin1.6 GBlink
DIrwin_spleen_macrophages_aged_b-thal_3133_S2-F12_1_13373.d/chromatography-data-pre.sqlite10.0 KBlink
DIrwin_spleen_macrophages_aged_b-thal_3133_S2-F12_1_13373.d/chromatography-data.sqlite432.0 KBlink
DIrwin_spleen_macrophages_aged_b-thal_3133_S2-F12_1_13373.d/chromatography-data.sqlite-journal0 Blink
DIrwin_spleen_macrophages_aged_b-thal_3133_S2-F12_1_13373.d/SampleInfo.xml4.9 KBlink
MSV000092457.yaml3.6 KBlink

general-ms/MSV000096674 ​

MassIVE · Thermo Orbitrap Astral — DDA-TMT, native vendor raw .raw. Broad-vendor demonstrator (raw only; one representative run).

filesizedownloadviewer
ec04479_qy_4cell_SanJose_A1.mzpeak88.8 MBlink▶ View
ec04479_qy_4cell_SanJose_A1.raw225.7 MBlink

general-ms/MSV000099123 ​

MassIVE · Bruker timsTOF Pro 2 — proteomics, native vendor raw .d (PASEF TDF). Broad-vendor demonstrator (raw only; one representative run).

filesizedownloadviewer
20240812_NW-NBSD-kgg_30min-Veh-A_rep1_S3-A1_1_8225.mzpeak1.5 GBlink▶ View
20240812_NW-NBSD-kgg_30min-Veh-A_rep1_S3-A1_1_8225.d/8225.m/backup-2024-08-12.m/DataAnalysis.Method10.8 KBlink
20240812_NW-NBSD-kgg_30min-Veh-A_rep1_S3-A1_1_8225.d/8225.m/backup-2024-08-12.m/diaSettings.diasqlite24.0 KBlink
20240812_NW-NBSD-kgg_30min-Veh-A_rep1_S3-A1_1_8225.d/8225.m/backup-2024-08-12.m/hystar.method6.7 KBlink
20240812_NW-NBSD-kgg_30min-Veh-A_rep1_S3-A1_1_8225.d/8225.m/backup-2024-08-12.m/lock.file0 Blink
20240812_NW-NBSD-kgg_30min-Veh-A_rep1_S3-A1_1_8225.d/8225.m/backup-2024-08-12.m/Maldi.method2.2 KBlink
20240812_NW-NBSD-kgg_30min-Veh-A_rep1_S3-A1_1_8225.d/8225.m/backup-2024-08-12.m/microTOFQImpacTemAcquisition.method209.1 KBlink
20240812_NW-NBSD-kgg_30min-Veh-A_rep1_S3-A1_1_8225.d/8225.m/backup-2024-08-12.m/prmSettings.prmsqlite44.0 KBlink
20240812_NW-NBSD-kgg_30min-Veh-A_rep1_S3-A1_1_8225.d/8225.m/backup-2024-08-12.m/submethods.xml1.1 KBlink
20240812_NW-NBSD-kgg_30min-Veh-A_rep1_S3-A1_1_8225.d/8225.m/backup-2024-08-12_1.m/DataAnalysis.Method10.8 KBlink
20240812_NW-NBSD-kgg_30min-Veh-A_rep1_S3-A1_1_8225.d/8225.m/backup-2024-08-12_1.m/diaSettings.diasqlite24.0 KBlink
20240812_NW-NBSD-kgg_30min-Veh-A_rep1_S3-A1_1_8225.d/8225.m/backup-2024-08-12_1.m/hystar.method6.7 KBlink
20240812_NW-NBSD-kgg_30min-Veh-A_rep1_S3-A1_1_8225.d/8225.m/backup-2024-08-12_1.m/lock.file0 Blink
20240812_NW-NBSD-kgg_30min-Veh-A_rep1_S3-A1_1_8225.d/8225.m/backup-2024-08-12_1.m/Maldi.method2.2 KBlink
20240812_NW-NBSD-kgg_30min-Veh-A_rep1_S3-A1_1_8225.d/8225.m/backup-2024-08-12_1.m/microTOFQImpacTemAcquisition.method209.5 KBlink
20240812_NW-NBSD-kgg_30min-Veh-A_rep1_S3-A1_1_8225.d/8225.m/backup-2024-08-12_1.m/prmSettings.prmsqlite44.0 KBlink
20240812_NW-NBSD-kgg_30min-Veh-A_rep1_S3-A1_1_8225.d/8225.m/backup-2024-08-12_1.m/submethods.xml1.1 KBlink
20240812_NW-NBSD-kgg_30min-Veh-A_rep1_S3-A1_1_8225.d/8225.m/DataAnalysis.Method10.8 KBlink
20240812_NW-NBSD-kgg_30min-Veh-A_rep1_S3-A1_1_8225.d/8225.m/desktop.ini170 Blink
20240812_NW-NBSD-kgg_30min-Veh-A_rep1_S3-A1_1_8225.d/8225.m/diaSettings.diasqlite24.0 KBlink
20240812_NW-NBSD-kgg_30min-Veh-A_rep1_S3-A1_1_8225.d/8225.m/diaSettings.sqlite.bak24.0 KBlink
20240812_NW-NBSD-kgg_30min-Veh-A_rep1_S3-A1_1_8225.d/8225.m/hystar.method6.7 KBlink
20240812_NW-NBSD-kgg_30min-Veh-A_rep1_S3-A1_1_8225.d/8225.m/InstrumentSetup.isset3.0 KBlink
20240812_NW-NBSD-kgg_30min-Veh-A_rep1_S3-A1_1_8225.d/8225.m/lock.file0 Blink
20240812_NW-NBSD-kgg_30min-Veh-A_rep1_S3-A1_1_8225.d/8225.m/Maldi.method2.6 KBlink
20240812_NW-NBSD-kgg_30min-Veh-A_rep1_S3-A1_1_8225.d/8225.m/microTOFQImpacTemAcquisition.method209.5 KBlink
20240812_NW-NBSD-kgg_30min-Veh-A_rep1_S3-A1_1_8225.d/8225.m/prmSettings.prmsqlite44.0 KBlink
20240812_NW-NBSD-kgg_30min-Veh-A_rep1_S3-A1_1_8225.d/8225.m/prmSettings.prmsqlite.bak44.0 KBlink
20240812_NW-NBSD-kgg_30min-Veh-A_rep1_S3-A1_1_8225.d/8225.m/submethods.xml1.2 KBlink
20240812_NW-NBSD-kgg_30min-Veh-A_rep1_S3-A1_1_8225.d/8225.m/synchroSettings.syncsqlite4.0 KBlink
20240812_NW-NBSD-kgg_30min-Veh-A_rep1_S3-A1_1_8225.d/analysis.tdf130.4 MBlink
20240812_NW-NBSD-kgg_30min-Veh-A_rep1_S3-A1_1_8225.d/analysis.tdf_bin1.4 GBlink
20240812_NW-NBSD-kgg_30min-Veh-A_rep1_S3-A1_1_8225.d/chromatography-data-pre.sqlite112.0 KBlink
20240812_NW-NBSD-kgg_30min-Veh-A_rep1_S3-A1_1_8225.d/chromatography-data.sqlite524.0 KBlink
20240812_NW-NBSD-kgg_30min-Veh-A_rep1_S3-A1_1_8225.d/chromatography-data.sqlite-journal0 Blink
20240812_NW-NBSD-kgg_30min-Veh-A_rep1_S3-A1_1_8225.d/desktop.ini140 Blink
20240812_NW-NBSD-kgg_30min-Veh-A_rep1_S3-A1_1_8225.d/HyStarMetadata.xml95.1 KBlink
20240812_NW-NBSD-kgg_30min-Veh-A_rep1_S3-A1_1_8225.d/SampleInfo.xml5.2 KBlink

general-ms/MTBLS11742 ​

MetaboLights · Agilent 5977B MSD — flux GC-MS, native vendor raw .D (doi:10.1038/s41586-025-08635-6). Broad-vendor demonstrator (raw only).

filesizedownloadviewer
blank1.D.zip1.4 MBlink

general-ms/MTBLS243 ​

MetaboLights · Agilent 6490 Triple Quadrupole — dynamic-MRM metabolomics, native vendor raw .d. Broad-vendor demonstrator (raw only).

filesizedownloadviewer
03_D24062013T1259_1399CBU_01QC_A3.d.zip1.2 MBlink

general-ms/MTBLS432 ​

MetaboLights · Shimadzu LCMS-IT-TOF — metabolome, native vendor raw .lcd. Broad-vendor demonstrator (raw only).

filesizedownloadviewer
6-wk_HZ_CC_male_37_74__30min_pos-neg_100.lcd7.0 MBlink

general-ms/MTBLS5861 ​

MetaboLights · Shimadzu LCMS-9030 Q-TOF — lipidomics (OAD), native vendor raw .lcd. Broad-vendor demonstrator (raw only; one representative run).

filesizedownloadviewer
HEK_PosOAD1.mzpeak30.1 MBlink▶ View
HEK_PosOAD1.lcd60.3 MBlink

general-ms/PXD018751 ​

PRIDE · Thermo LCQ Deca XP — IEF/SCX/RPLC proteomics, vendor raw .raw (zip). Broad-vendor demonstrator (raw only; one representative run).

filesizedownloadviewer
XinjiangecotyperootRAW.zip396.5 MBlink

general-ms/PXD022801 ​

PRIDE / iProX · SCIEX QTRAP 6500+ — MRM metabolome, vendor raw .wiff. Broad-vendor demonstrator (raw only).

filesizedownloadviewer
IPX0002633001_D-239.mzpeak126.1 KBlink▶ View
IPX0002633001_D-239.wiff384.0 KBlink
IPX0002633001_D-239.wiff.scan71.7 KBlink
IPX0002633002_D-239.wiff816.0 KBlink
IPX0002633002_D-239.wiff.scan132.6 KBlink

general-ms/PXD044023 ​

PRIDE · Bruker amaZon ETD — GeLC-MS, vendor raw .d (zip). Broad-vendor demonstrator (raw only; one representative run).

filesizedownloadviewer
37090_B9-2_20140710003.d.zip75.9 MBlink

general-ms/PXD045201 ​

PRIDE · Thermo Orbitrap Eclipse — top-down, native vendor raw .raw. Broad-vendor demonstrator (raw only).

filesizedownloadviewer
20200214_rmi049_75umPLRPS_Allen_CD3_F6_b.mzpeak11.5 MBlink▶ View
20200214_rmi049_75umPLRPS_Allen_CD3_F6_b.raw159.3 MBlink

general-ms/PXD053710 ​

PRIDE · SCIEX ZenoTOF 7600 — Zeno-SWATH exposome, vendor raw .wiff. Broad-vendor demonstrator (raw only).

filesizedownloadviewer
230120-Exposome_A10-526-C_EX_1ul_zSWATH_37m_r01.wiff8.7 MBlink
230120-Exposome_A10-526-C_EX_1ul_zSWATH_37m_r01.wiff.scan648.2 MBlink

general-ms/PXD057269 ​

PRIDE · Thermo TSQ Altis — SRM, vendor raw .raw. Broad-vendor demonstrator (raw only; one representative run).

filesizedownloadviewer
LD401_001fmol_r1.mzpeak2.1 MBlink▶ View
LD401_001fmol_r1.raw112.0 MBlink

general-ms/PXD059353 ​

PRIDE · Waters Synapt G2-Si — HDX MSE, vendor raw .raw. Broad-vendor demonstrator (raw only).

filesizedownloadviewer
TD.zip940.4 MBlink

general-ms/PXD065872 ​

PRIDE / jPOST · SCIEX TripleTOF 6600 — SWATH/DIA, vendor raw .wiff. Broad-vendor demonstrator (raw only).

filesizedownloadviewer
241213_Ozaki_Brain_1_SWATH.wiff9.2 MBlink
241213_Ozaki_Brain_1_SWATH.wiff.scan3.2 GBlink

general-ms/PXD073126 ​

PRIDE · Waters Synapt XS — HDDDA ion mobility, vendor raw .raw. Broad-vendor demonstrator (raw only).

filesizedownloadviewer
250501_ZMM_KMI_sFtsk_2.raw.zip1.1 GBlink

general-ms/PXD076001 ​

PRIDE / iProX · Thermo Orbitrap Astral — DIA, native vendor raw .raw. Broad-vendor demonstrator (raw only).

filesizedownloadviewer
Astral-3_24_FPEP250646839-1A.mzpeak963.8 MBlink▶ View
Astral-3_24_FPEP250646839-1A.raw2.5 GBlink

general-ms/PXD076861 ​

PRIDE · Bruker impact HD — native MS, vendor raw .d. Broad-vendor demonstrator (raw only).

filesizedownloadviewer
NreB_PAS_DECONV.d.zip216.0 MBlink

general-ms/agilent-6490-triplequad ​

MetaboLights MTBLS648 · Agilent 6490 triple-quad — native vendor .d (replaces PXD041762, which deposited no raw).

filesizedownloadviewer
PC_Allan1.mzpeak303.3 KBlink▶ View
PC_Allan1.d/AcqData/09022016 krishna phospholipid dmrm dhc_pc.m/192_1.stg8.0 KBlink
PC_Allan1.d/AcqData/09022016 krishna phospholipid dmrm dhc_pc.m/192_1.xml358.4 KBlink
PC_Allan1.d/AcqData/09022016 krishna phospholipid dmrm dhc_pc.m/BinPump_1.XML13.5 KBlink
PC_Allan1.d/AcqData/09022016 krishna phospholipid dmrm dhc_pc.m/BinPump_1_MethodMetaData.XML188 Blink
PC_Allan1.d/AcqData/09022016 krishna phospholipid dmrm dhc_pc.m/DaMethod/Qual/info.xml201 Blink
PC_Allan1.d/AcqData/09022016 krishna phospholipid dmrm dhc_pc.m/DaMethod/Qual/method.xml478 Blink
PC_Allan1.d/AcqData/09022016 krishna phospholipid dmrm dhc_pc.m/DaMethod/Quant/info.xml201 Blink
PC_Allan1.d/AcqData/09022016 krishna phospholipid dmrm dhc_pc.m/DaMethod/Quant/method.xml519 Blink
PC_Allan1.d/AcqData/09022016 krishna phospholipid dmrm dhc_pc.m/HiP-ALS_1.XML3.1 KBlink
PC_Allan1.d/AcqData/09022016 krishna phospholipid dmrm dhc_pc.m/HiP-ALS_1_MethodMetaData.XML188 Blink
PC_Allan1.d/AcqData/09022016 krishna phospholipid dmrm dhc_pc.m/HiP-ALS_1_Pretreatment.XML1.6 KBlink
PC_Allan1.d/AcqData/09022016 krishna phospholipid dmrm dhc_pc.m/info.xml606 Blink
PC_Allan1.d/AcqData/09022016 krishna phospholipid dmrm dhc_pc.m/msgeneral.xsd16.7 KBlink
PC_Allan1.d/AcqData/09022016 krishna phospholipid dmrm dhc_pc.m/msquad.xsd2.8 KBlink
PC_Allan1.d/AcqData/09022016 krishna phospholipid dmrm dhc_pc.m/qqqacqmeth.xsd10.9 KBlink
PC_Allan1.d/AcqData/09022016 krishna phospholipid dmrm dhc_pc.m/qqqacqmethod.xsd385 Blink
PC_Allan1.d/AcqData/09022016 krishna phospholipid dmrm dhc_pc.m/TCC_1.XML1.9 KBlink
PC_Allan1.d/AcqData/09022016 krishna phospholipid dmrm dhc_pc.m/TCC_1_MethodMetaData.XML188 Blink
PC_Allan1.d/AcqData/AcqMethod.xml1.7 MBlink
PC_Allan1.d/AcqData/atunes.TUNE.XML41.2 KBlink
PC_Allan1.d/AcqData/BinPump1.cd611 Blink
PC_Allan1.d/AcqData/BinPump1.cg608.4 KBlink
PC_Allan1.d/AcqData/Contents.xml1.3 KBlink
PC_Allan1.d/AcqData/DeviceConfigInfo.xml8.2 KBlink
PC_Allan1.d/AcqData/Devices.xml1.5 KBlink
PC_Allan1.d/AcqData/HiP-ALS1.cd171 Blink
PC_Allan1.d/AcqData/HiP-ALS1.cg5.1 KBlink
PC_Allan1.d/AcqData/MSPeak.bin137.5 KBlink
PC_Allan1.d/AcqData/MSScan.bin2.1 MBlink
PC_Allan1.d/AcqData/MSScan.xsd3.3 KBlink
PC_Allan1.d/AcqData/MSTS.xml355 Blink
PC_Allan1.d/AcqData/sample_info.xml5.1 KBlink
PC_Allan1.d/AcqData/TCC1.cd273 Blink
PC_Allan1.d/AcqData/TCC1.cg10.2 KBlink
PC_Allan1.d/AcqData/Worklist.xml14.3 KBlink
PC_Allan1.d/desktop.ini80 Blink
PC_Allan1.d/Results/Qual/Version3/QualDAMethod.m/DaMethod/Qual/info.xml111 Blink
PC_Allan1.d/Results/Qual/Version3/QualDAMethod.m/DaMethod/Qual/qualitative.xml554.6 KBlink
PC_Allan1.d/Results/Qual/Version3/QualResult.bin293.8 KBlink
README.md992 Blink

general-ms/agilent-6560-dtims-imqtof ​

Zenodo 18481720 · Agilent 6560 IM-QTOF — drift-tube ion mobility (DTIMS), CE-MS standard mix.

filesizedownloadviewer
CEMS_10ppm.mzpeak313.9 KBlink▶ View
CEMS_10ppm.mzML3.3 MBlink
README.md1.1 KBlink

general-ms/agilent-8890-gc-ei ​

MetaboLights MTBLS11550 · Agilent 8890 GC / 7000D — electron-ionization GC-MS.

filesizedownloadviewer
EFWS-1.mzpeak1.7 MBlink▶ View
EFWS-1.mzML15.9 MBlink
README.md980 Blink

general-ms/agilent-qtof ​

MetaboLights MTBLS14741 · Agilent LC-QTOF — C18 isoflavone, native vendor .d (replaces Zenodo 18502866, a mislabeled QqQ chromatogram-only mzML with no raw).

filesizedownloadviewer
240319-LL-LeeMaire_c18-isoflavone-pos-S25.mzpeak191.2 MBlink▶ View
240319-LL-LeeMaire_c18-isoflavone-pos-S25.d/AcqData/220608-LL-isoflavones-c18-pos.m/191_1.stg13.5 KBlink
240319-LL-LeeMaire_c18-isoflavone-pos-S25.d/AcqData/220608-LL-isoflavones-c18-pos.m/BinPump_1.xml13.0 KBlink
240319-LL-LeeMaire_c18-isoflavone-pos-S25.d/AcqData/220608-LL-isoflavones-c18-pos.m/DAD_1.xml3.0 KBlink
240319-LL-LeeMaire_c18-isoflavone-pos-S25.d/AcqData/220608-LL-isoflavones-c18-pos.m/DaMethod/Qual/info.xml201 Blink
240319-LL-LeeMaire_c18-isoflavone-pos-S25.d/AcqData/220608-LL-isoflavones-c18-pos.m/DaMethod/Qual/method.xml467 Blink
240319-LL-LeeMaire_c18-isoflavone-pos-S25.d/AcqData/220608-LL-isoflavones-c18-pos.m/DaMethod/Quant/info.xml201 Blink
240319-LL-LeeMaire_c18-isoflavone-pos-S25.d/AcqData/220608-LL-isoflavones-c18-pos.m/DaMethod/Quant/method.xml519 Blink
240319-LL-LeeMaire_c18-isoflavone-pos-S25.d/AcqData/220608-LL-isoflavones-c18-pos.m/HiP-ALS_1.xml7.2 KBlink
240319-LL-LeeMaire_c18-isoflavone-pos-S25.d/AcqData/220608-LL-isoflavones-c18-pos.m/HiP-ALS_1_MethodMetaData.xml188 Blink
240319-LL-LeeMaire_c18-isoflavone-pos-S25.d/AcqData/220608-LL-isoflavones-c18-pos.m/HiP-ALS_1_Pretreatment.xml5.8 KBlink
240319-LL-LeeMaire_c18-isoflavone-pos-S25.d/AcqData/220608-LL-isoflavones-c18-pos.m/info.xml600 Blink
240319-LL-LeeMaire_c18-isoflavone-pos-S25.d/AcqData/220608-LL-isoflavones-c18-pos.m/TCC_1.xml3.3 KBlink
240319-LL-LeeMaire_c18-isoflavone-pos-S25.d/AcqData/AcqMethod.xml155.0 KBlink
240319-LL-LeeMaire_c18-isoflavone-pos-S25.d/AcqData/BinPump1.cd611 Blink
240319-LL-LeeMaire_c18-isoflavone-pos-S25.d/AcqData/BinPump1.cg704.2 KBlink
240319-LL-LeeMaire_c18-isoflavone-pos-S25.d/AcqData/Contents.xml1.4 KBlink
240319-LL-LeeMaire_c18-isoflavone-pos-S25.d/AcqData/DAD1.cd380 Blink
240319-LL-LeeMaire_c18-isoflavone-pos-S25.d/AcqData/DAD1.cg175.9 KBlink
240319-LL-LeeMaire_c18-isoflavone-pos-S25.d/AcqData/DefaultMassCal.xml2.8 KBlink
240319-LL-LeeMaire_c18-isoflavone-pos-S25.d/AcqData/DeviceConfigInfo.xml11.4 KBlink
240319-LL-LeeMaire_c18-isoflavone-pos-S25.d/AcqData/Devices.xml1.6 KBlink
240319-LL-LeeMaire_c18-isoflavone-pos-S25.d/AcqData/HiP-ALS1.cd171 Blink
240319-LL-LeeMaire_c18-isoflavone-pos-S25.d/AcqData/HiP-ALS1.cg58.7 KBlink
240319-LL-LeeMaire_c18-isoflavone-pos-S25.d/AcqData/InstrConfig.pdf18.7 KBlink
240319-LL-LeeMaire_c18-isoflavone-pos-S25.d/AcqData/InstrConfig.xml14.6 KBlink
240319-LL-LeeMaire_c18-isoflavone-pos-S25.d/AcqData/MSActualDefs.xml26.1 KBlink
240319-LL-LeeMaire_c18-isoflavone-pos-S25.d/AcqData/MSMassCal.bin123.3 KBlink
240319-LL-LeeMaire_c18-isoflavone-pos-S25.d/AcqData/MSPeak.bin31.3 MBlink
240319-LL-LeeMaire_c18-isoflavone-pos-S25.d/AcqData/MSPeriodicActuals.bin20.0 KBlink
240319-LL-LeeMaire_c18-isoflavone-pos-S25.d/AcqData/MSProfile.bin208.5 MBlink
240319-LL-LeeMaire_c18-isoflavone-pos-S25.d/AcqData/MSScan.bin416.8 KBlink
240319-LL-LeeMaire_c18-isoflavone-pos-S25.d/AcqData/MSScan.xsd4.3 KBlink
240319-LL-LeeMaire_c18-isoflavone-pos-S25.d/AcqData/MSTS.xml699 Blink
240319-LL-LeeMaire_c18-isoflavone-pos-S25.d/AcqData/sample_info.xml7.4 KBlink
240319-LL-LeeMaire_c18-isoflavone-pos-S25.d/AcqData/TCC1.cd273 Blink
240319-LL-LeeMaire_c18-isoflavone-pos-S25.d/AcqData/TCC1.cg11.8 KBlink
240319-LL-LeeMaire_c18-isoflavone-pos-S25.d/desktop.ini80 Blink
README.md1.2 KBlink

general-ms/bruker-impact-ii-qtof ​

MetaboLights MTBLS14574 · Bruker impact II UHR-QTOF — native vendor .d (BAF) (replaces MTBLS12824, which deposited no raw).

filesizedownloadviewer
FM_1-1_01_20254.mzpeak446.6 MBlink▶ View
FM_1-1_01_20254.d/analysis.0.DataAnalysis.method6.8 KBlink
FM_1-1_01_20254.d/analysis.0.result_c65.8 KBlink
FM_1-1_01_20254.d/analysis.baf681.0 MBlink
FM_1-1_01_20254.d/analysis.baf_idx246.1 KBlink
FM_1-1_01_20254.d/analysis.baf_xtr686.2 KBlink
FM_1-1_01_20254.d/analysis.content116 Blink
FM_1-1_01_20254.d/BackgroundLineNeg.ami18.9 MBlink
FM_1-1_01_20254.d/BackgroundProfNeg.ami25.7 MBlink
FM_1-1_01_20254.d/calib.bin2.4 KBlink
FM_1-1_01_20254.d/Calibrator.ami1.8 KBlink
FM_1-1_01_20254.d/DensViewNeg.ami19.8 MBlink
FM_1-1_01_20254.d/DensViewNegBBCID.ami31.6 KBlink
FM_1-1_01_20254.d/DensViewNegBBCIDBgnd.ami27.1 KBlink
FM_1-1_01_20254.d/DensViewNegBgnd.ami15.6 MBlink
FM_1-1_01_20254.d/desktop.ini324 Blink
FM_1-1_01_20254.d/ebe56f4d-5288-466c-ba18-04a2b182a256_1.mcf223 Blink
FM_1-1_01_20254.d/ebe56f4d-5288-466c-ba18-04a2b182a256_1.mcf_idx15.0 KBlink
FM_1-1_01_20254.d/ebe56f4d-5288-466c-ba18-04a2b182a256_2.mcf223 Blink
FM_1-1_01_20254.d/ebe56f4d-5288-466c-ba18-04a2b182a256_2.mcf_idx26.0 KBlink
FM_1-1_01_20254.d/FM_1-1_01_20254.hdx528 Blink
FM_1-1_01_20254.d/FM_1-1_01_20254.u27.0 KBlink
FM_1-1_01_20254.d/FM_1-1_01_20254.unt38.2 KBlink
FM_1-1_01_20254.d/HS_columns.xmc1.1 KBlink
FM_1-1_01_20254.d/icta_11min_neg_semfrag_20254.m/DataAnalysis.Method6.8 KBlink
FM_1-1_01_20254.d/icta_11min_neg_semfrag_20254.m/hystar.method22.7 KBlink
FM_1-1_01_20254.d/icta_11min_neg_semfrag_20254.m/lock.file0 Blink
FM_1-1_01_20254.d/icta_11min_neg_semfrag_20254.m/microTOFQImpactAcquisition.method115.0 KBlink
FM_1-1_01_20254.d/icta_11min_neg_semfrag_20254.m/submethods.xml794 Blink
FM_1-1_01_20254.d/LCParms.txt2.8 KBlink
FM_1-1_01_20254.d/LockInfo99 Blink
FM_1-1_01_20254.d/NuGenesisTemplate.txt205 Blink
FM_1-1_01_20254.d/ProjectCreationHelper0 Blink
FM_1-1_01_20254.d/SampleInfo.xml1.3 KBlink
FM_1-1_01_20254.d/shimadzu.hss32.7 KBlink
FM_1-1_01_20254.d/Storage.mcf_idx24.0 KBlink
FM_1-1_01_20254.d/SyncHelper0 Blink
README.md1.2 KBlink

general-ms/bruker-microtof-q2 ​

MetaboLights MTBLS520 · Bruker micrOTOF-Q II ESI-QTOF (bryophyte seasonal metabolomics; Peters et al. 2018).

filesizedownloadviewer
neg_01_Fistax_1-A,2_01_5715.mzpeak36.6 MBlink▶ View
neg_01_Fistax_1-A,2_01_5715.mzML56.6 MBlink
README.md540 Blink

general-ms/bruker-timstof-pro ​

MassIVE MSV000101607 · Bruker timsTOF Pro — PASEF / TIMS ion mobility.

filesizedownloadviewer
SBA415.mzpeak714.4 MBlink▶ View
raw/SBA415_Try.d/SBA415(1) Try_Slot1-2_1_8271.d/2026-04-08_01-43-12_Two-column-separation/column_setpoint.txt2.2 MBlink
raw/SBA415_Try.d/SBA415(1) Try_Slot1-2_1_8271.d/2026-04-08_01-43-12_Two-column-separation/column_temperature.txt2.2 MBlink
raw/SBA415_Try.d/SBA415(1) Try_Slot1-2_1_8271.d/2026-04-08_01-43-12_Two-column-separation/execution-log_2026-04-08_01-43-11-AM.txt68.4 KBlink
raw/SBA415_Try.d/SBA415(1) Try_Slot1-2_1_8271.d/2026-04-08_01-43-12_Two-column-separation/flowsensor-a_flow.txt790.8 KBlink
raw/SBA415_Try.d/SBA415(1) Try_Slot1-2_1_8271.d/2026-04-08_01-43-12_Two-column-separation/flowsensor-b_flow.txt1.3 MBlink
raw/SBA415_Try.d/SBA415(1) Try_Slot1-2_1_8271.d/2026-04-08_01-43-12_Two-column-separation/pump-a_pressure.txt459.1 KBlink
raw/SBA415_Try.d/SBA415(1) Try_Slot1-2_1_8271.d/2026-04-08_01-43-12_Two-column-separation/pump-a_speed.txt2.1 MBlink
raw/SBA415_Try.d/SBA415(1) Try_Slot1-2_1_8271.d/2026-04-08_01-43-12_Two-column-separation/pump-a_temperature.txt222.1 KBlink
raw/SBA415_Try.d/SBA415(1) Try_Slot1-2_1_8271.d/2026-04-08_01-43-12_Two-column-separation/pump-a_volume.txt268.3 KBlink
raw/SBA415_Try.d/SBA415(1) Try_Slot1-2_1_8271.d/2026-04-08_01-43-12_Two-column-separation/pump-b_pressure.txt407.9 KBlink
raw/SBA415_Try.d/SBA415(1) Try_Slot1-2_1_8271.d/2026-04-08_01-43-12_Two-column-separation/pump-b_speed.txt1.9 MBlink
raw/SBA415_Try.d/SBA415(1) Try_Slot1-2_1_8271.d/2026-04-08_01-43-12_Two-column-separation/pump-b_temperature.txt222.1 KBlink
raw/SBA415_Try.d/SBA415(1) Try_Slot1-2_1_8271.d/2026-04-08_01-43-12_Two-column-separation/pump-b_volume.txt265.8 KBlink
raw/SBA415_Try.d/SBA415(1) Try_Slot1-2_1_8271.d/2026-04-08_01-43-12_Two-column-separation/sample-tray_temperature.txt218.6 KBlink
raw/SBA415_Try.d/SBA415(1) Try_Slot1-2_1_8271.d/2026-04-08_01-43-12_Two-column-separation/setflow-a_setflow.txt1.9 MBlink
raw/SBA415_Try.d/SBA415(1) Try_Slot1-2_1_8271.d/2026-04-08_01-43-12_Two-column-separation/setflow-b_setflow.txt1.9 MBlink
raw/SBA415_Try.d/SBA415(1) Try_Slot1-2_1_8271.d/2026-04-08_01-43-12_Two-column-separation/solvent-a_composition.txt2.1 MBlink
raw/SBA415_Try.d/SBA415(1) Try_Slot1-2_1_8271.d/2026-04-08_01-43-12_Two-column-separation/solvent-b_composition.txt2.1 MBlink
raw/SBA415_Try.d/SBA415(1) Try_Slot1-2_1_8271.d/2026-04-08_01-43-12_Two-column-separation/system-info_2026-04-08_01-43-11-AM.txt2.3 KBlink
raw/SBA415_Try.d/SBA415(1) Try_Slot1-2_1_8271.d/2026-04-08_01-43-12_Two-column-separation/system_activity.txt280.9 KBlink
raw/SBA415_Try.d/SBA415(1) Try_Slot1-2_1_8271.d/2026-04-08_01-43-12_Two-column-separation/valve-a_angle.txt2.2 MBlink
raw/SBA415_Try.d/SBA415(1) Try_Slot1-2_1_8271.d/2026-04-08_01-43-12_Two-column-separation/valve-b_angle.txt2.2 MBlink
raw/SBA415_Try.d/SBA415(1) Try_Slot1-2_1_8271.d/2026-04-08_01-43-12_Two-column-separation/valve-i_angle.txt222.1 KBlink
raw/SBA415_Try.d/SBA415(1) Try_Slot1-2_1_8271.d/2026-04-08_01-43-12_Two-column-separation/valve-t_angle.txt227.3 KBlink
raw/SBA415_Try.d/SBA415(1) Try_Slot1-2_1_8271.d/8271.m/backup-2026-04-08.m/diaSettings.diasqlite24.0 KBlink
raw/SBA415_Try.d/SBA415(1) Try_Slot1-2_1_8271.d/8271.m/backup-2026-04-08.m/hystar.method36.1 KBlink
raw/SBA415_Try.d/SBA415(1) Try_Slot1-2_1_8271.d/8271.m/backup-2026-04-08.m/Maldi.method1.3 KBlink
raw/SBA415_Try.d/SBA415(1) Try_Slot1-2_1_8271.d/8271.m/backup-2026-04-08.m/microTOFQImpacTemAcquisition.method188.1 KBlink
raw/SBA415_Try.d/SBA415(1) Try_Slot1-2_1_8271.d/8271.m/backup-2026-04-08.m/prmSettings.prmsqlite36.0 KBlink
raw/SBA415_Try.d/SBA415(1) Try_Slot1-2_1_8271.d/8271.m/backup-2026-04-08.m/submethods.xml933 Blink
raw/SBA415_Try.d/SBA415(1) Try_Slot1-2_1_8271.d/8271.m/backup-2026-04-08_1.m/diaSettings.diasqlite24.0 KBlink
raw/SBA415_Try.d/SBA415(1) Try_Slot1-2_1_8271.d/8271.m/backup-2026-04-08_1.m/hystar.method36.1 KBlink
raw/SBA415_Try.d/SBA415(1) Try_Slot1-2_1_8271.d/8271.m/backup-2026-04-08_1.m/Maldi.method1.3 KBlink
raw/SBA415_Try.d/SBA415(1) Try_Slot1-2_1_8271.d/8271.m/backup-2026-04-08_1.m/microTOFQImpacTemAcquisition.method193.6 KBlink
raw/SBA415_Try.d/SBA415(1) Try_Slot1-2_1_8271.d/8271.m/backup-2026-04-08_1.m/prmSettings.prmsqlite36.0 KBlink
raw/SBA415_Try.d/SBA415(1) Try_Slot1-2_1_8271.d/8271.m/backup-2026-04-08_1.m/submethods.xml939 Blink
raw/SBA415_Try.d/SBA415(1) Try_Slot1-2_1_8271.d/8271.m/desktop.ini156 Blink
raw/SBA415_Try.d/SBA415(1) Try_Slot1-2_1_8271.d/8271.m/diaSettings.diasqlite24.0 KBlink
raw/SBA415_Try.d/SBA415(1) Try_Slot1-2_1_8271.d/8271.m/hystar.method36.1 KBlink
raw/SBA415_Try.d/SBA415(1) Try_Slot1-2_1_8271.d/8271.m/InstrumentSetup.isset3.0 KBlink
raw/SBA415_Try.d/SBA415(1) Try_Slot1-2_1_8271.d/8271.m/Maldi.method2.6 KBlink
raw/SBA415_Try.d/SBA415(1) Try_Slot1-2_1_8271.d/8271.m/microTOFQImpacTemAcquisition.method192.1 KBlink
raw/SBA415_Try.d/SBA415(1) Try_Slot1-2_1_8271.d/8271.m/prmSettings.prmsqlite44.0 KBlink
raw/SBA415_Try.d/SBA415(1) Try_Slot1-2_1_8271.d/8271.m/submethods.xml1001 Blink
raw/SBA415_Try.d/SBA415(1) Try_Slot1-2_1_8271.d/8271.m/synchroSettings.syncsqlite4.0 KBlink
raw/SBA415_Try.d/SBA415(1) Try_Slot1-2_1_8271.d/analysis.tdf196.1 MBlink
raw/SBA415_Try.d/SBA415(1) Try_Slot1-2_1_8271.d/analysis.tdf_bin1.8 GBlink
raw/SBA415_Try.d/SBA415(1) Try_Slot1-2_1_8271.d/chromatography-data-pre.sqlite128.0 KBlink
raw/SBA415_Try.d/SBA415(1) Try_Slot1-2_1_8271.d/chromatography-data.sqlite1.4 MBlink
raw/SBA415_Try.d/SBA415(1) Try_Slot1-2_1_8271.d/desktop.ini140 Blink
raw/SBA415_Try.d/SBA415(1) Try_Slot1-2_1_8271.d/HyStarMetadata.xml110.7 KBlink
raw/SBA415_Try.d/SBA415(1) Try_Slot1-2_1_8271.d/SampleInfo.xml4.8 KBlink
README.md732 Blink
SBA415.mzML1.4 GBlink

general-ms/sciex-qtrap-6500 ​

MetaboLights MTBLS14853 · SCIEX QTRAP 6500 — native vendor .wiff (replaces PXD066465, which deposited no raw).

filesizedownloadviewer
En_PPY.mzpeak4.3 MBlink▶ View
En_PPY.wiff27.2 MBlink
En_PPY.wiff.scan2.4 MBlink
README.md1004 Blink

general-ms/sciex-tripletof-6600 ​

Zenodo 17416537 · SCIEX TripleTOF 6600 — DIA / SWATH.

filesizedownloadviewer
12_80.mzpeak130.0 MBlink▶ View
12_80.mzML243.1 MBlink
README.md453 Blink

general-ms/sciex-zenotof-7600 ​

MassIVE MSV000095995 · SCIEX ZenoTOF 7600 — EAD / Zeno top-down (Searfoss et al. 2025).

filesizedownloadviewer
20240826_RNAseB_Reduced_50ngul_1ul_MRM_03.mzpeak48.4 MBlink▶ View
20240826_RNAseB_Reduced_50ngul_1ul_MRM_03.mzML89.8 MBlink
20240826_RNAseB_Reduced_50ngul_1ul_MRM_03.wiff2.1 MBlink
20240826_RNAseB_Reduced_50ngul_1ul_MRM_03.wiff.scan69.0 MBlink
20240826_RNAseB_Reduced_50ngul_1ul_MRM_03.wiff22.4 MBlink
README.md1.1 KBlink

general-ms/shimadzu-lcms-9030-qtof ​

MetaboLights MTBLS13204 · Shimadzu LCMS-9030 Q-TOF (seaweed metabolomics).

filesizedownloadviewer
Blind_P1_pos_012.mzpeak2.9 MBlink▶ View
Blind_P1_pos_012.lcd52.9 MBlink
Blind_P1_pos_012.mzML36.2 MBlink
README.md850 Blink

general-ms/thermo-fusion-lumos ​

PRIDE PXD008952 · Thermo Orbitrap Fusion Lumos — CPTAC NCI-7 TMT (Clark et al. 2018).

filesizedownloadviewer
01_CPTAC_TMTS1-NCI7_P_JHUZ_20170509_LUMOS.mzpeak148.4 MBlink▶ View
01_CPTAC_TMTS1-NCI7_P_JHUZ_20170509_LUMOS.mzML588.6 MBlink
01_CPTAC_TMTS1-NCI7_P_JHUZ_20170509_LUMOS.raw659.4 MBlink
README.md575 Blink

general-ms/thermo-ltq-ft-ultra-fticr ​

MetaboLights MTBLS3512 · Thermo LTQ FT Ultra — FT-ICR (marine dissolved organic matter; Liu et al. 2020).

filesizedownloadviewer
mtab_BIOS_CRAM1620_1_072617_34.mzpeak5.4 MBlink▶ View
mtab_BIOS_CRAM1620_1_072617_34.mzML30.2 MBlink
mtab_BIOS_CRAM1620_1_072617_34.RAW221.1 MBlink
README.md966 Blink

general-ms/thermo-ltq-orbitrap-velos ​

PRIDE PXD000001 · Thermo LTQ Orbitrap Velos — TMT “Erwinia” spike-in, the first ProteomeXchange dataset (Gatto & Christoforou 2013).

filesizedownloadviewer
TMT_Erwinia_1uLSike_Top10HCD_isol2_45stepped_60min_01-20141210.mzpeak109.5 MBlink▶ View
README.md639 Blink
TMT_Erwinia_1uLSike_Top10HCD_isol2_45stepped_60min_01-20141210.mzML429.2 MBlink
TMT_Erwinia_1uLSike_Top10HCD_isol2_45stepped_60min_01.raw210.3 MBlink

general-ms/thermo-ltq-xl-iontrap ​

PRIDE PXD059878 · Thermo LTQ XL — pure linear ion trap (PC4 acetylation; Agrawal et al. 2025).

filesizedownloadviewer
2013_30_Amrutha_050713_1.mzpeak52.3 MBlink▶ View
2013_30_Amrutha_050713_1.mzML173.5 MBlink
2013_30_Amrutha_050713_1.raw69.7 MBlink
README.md942 Blink

general-ms/thermo-orbitrap-astral ​

MassIVE MSV000100943 · Thermo Orbitrap Astral — high-throughput DIA plasma proteomics (Coon lab 2025).

filesizedownloadviewer
20240912_WFB_exp01_magnet_5_0.mzpeak107.6 MBlink▶ View
20240912_WFB_exp01_magnet_5_0.mzML299.9 MBlink
20240912_WFB_exp01_magnet_5_0.raw8.4 GBlink
README.md783 Blink

general-ms/thermo-orbitrap-astral-PXD049028 ​

filesizedownloadviewer
20231206_HAP1_1ug_60min_DIA_2Th_5e4_3p5ms_rep03.mzpeak8.2 GBlink▶ View
20231206_HAP1_1ug_60min_DIA_2Th_5e4_3p5ms_rep03.mzML224.5 MBlink
20231206_HAP1_1ug_60min_DIA_2Th_5e4_3p5ms_rep03.raw20.6 GBlink
README.md1.3 KBlink

general-ms/thermo-qexactive-plus ​

MetaboLights MTBLS14885 · Thermo Q Exactive Plus — native vendor .raw (replaces Zenodo 17549994, an mzML-only re-deposit with no raw).

filesizedownloadviewer
NEG_Hg22CP_GPSC_1.mzpeak70.5 MBlink▶ View
NEG_Hg22CP_GPSC_1.raw121.0 MBlink
README.md520 Blink

general-ms/thermo-qexactive-plus-PXD077619 ​

filesizedownloadviewer
QEP2_11961_RDA_GITR_GA_Afuc_200820.mzpeak94.4 MBlink▶ View
QEP2_11961_RDA_GITR_GA_Afuc_200820.mzML457.7 MBlink
README.md832 Blink

general-ms/waters-pda-uv ​

ProteoWizard Waters vendor-reader test data · Waters ACQUITY UPLC PDA — the corpus's UV / photodiode-array exemplar: ProteoWizard read the PDA function from a MassLynx .raw and wrote wavelength array (190–500 nm) + electromagnetic radiation (absorption) spectra. Demonstrates mzPeak's UV wavelength_spectra facet — the rare case of UV spectra carried inside the mzML.

filesizedownloadviewer
QC_LCMS2-2_23_268-1-1.mzpeak157.0 KBlink▶ View
QC_LCMS2-2_23_268-1-1.mzML83.1 KBlink

general-ms/waters-synapt-g2si-hdmse ​

MetaboLights MTBLS812 · Waters SYNAPT G2-Si HDMS — HDMSe traveling-wave ion mobility (TWIMS); LC-IMS-MS metabolomics of pancreatic-cancer cell lines (Drabik et al.). Per-spectrum drift time (MS:1002476) — the corpus's Waters ion-mobility exemplar, alongside Agilent DTIMS and Bruker timsTOF PASEF.

filesizedownloadviewer
20181203_Capan2_1.raw/_extern.inf8.1 KBlink
20181203_Capan2_1.raw/_func001.cdt236.1 MBlink
20181203_Capan2_1.raw/_FUNC001.DAT227.9 MBlink
20181203_Capan2_1.raw/_FUNC001.IDX20.0 KBlink
20181203_Capan2_1.raw/_func001.ind2.6 MBlink
20181203_Capan2_1.raw/_FUNC001.STS104.5 KBlink
20181203_Capan2_1.raw/_func002.cdt171.3 MBlink
20181203_Capan2_1.raw/_FUNC002.DAT180.8 MBlink
20181203_Capan2_1.raw/_FUNC002.IDX20.0 KBlink
20181203_Capan2_1.raw/_func002.ind2.6 MBlink
20181203_Capan2_1.raw/_FUNC002.STS104.4 KBlink
20181203_Capan2_1.raw/_func003.cdt2.0 MBlink
20181203_Capan2_1.raw/_FUNC003.DAT4.2 MBlink
20181203_Capan2_1.raw/_FUNC003.IDX720 Blink
20181203_Capan2_1.raw/_func003.ind94.1 KBlink
20181203_Capan2_1.raw/_FUNC003.STS6.1 KBlink
20181203_Capan2_1.raw/_func004.cdt17.5 MBlink
20181203_Capan2_1.raw/_FUNC004.DAT77.2 MBlink
20181203_Capan2_1.raw/_FUNC004.IDX5.9 KBlink
20181203_Capan2_1.raw/_func004.ind783.6 KBlink
20181203_Capan2_1.raw/_FUNC004.STS32.4 KBlink
20181203_Capan2_1.raw/_func005.cdt21.1 MBlink
20181203_Capan2_1.raw/_FUNC005.DAT92.9 MBlink
20181203_Capan2_1.raw/_FUNC005.IDX5.9 KBlink
20181203_Capan2_1.raw/_func005.ind783.6 KBlink
20181203_Capan2_1.raw/_FUNC005.STS32.4 KBlink
20181203_Capan2_1.raw/_func006.cdt1.5 MBlink
20181203_Capan2_1.raw/_FUNC006.DAT8.0 MBlink
20181203_Capan2_1.raw/_FUNC006.IDX5.9 KBlink
20181203_Capan2_1.raw/_func006.ind783.6 KBlink
20181203_Capan2_1.raw/_FUNC006.STS32.4 KBlink
20181203_Capan2_1.raw/_FUNCTNS.INF2.4 KBlink
20181203_Capan2_1.raw/_HEADER.TXT5.7 KBlink
20181203_Capan2_1.raw/_INLET.INF3.6 KBlink
20181203_Capan2_1.raw/mob_cal.csv487 Blink

general-ms/waters-xevo-g2s-qtof ​

MetaboLights MTBLS1129 · Waters Xevo G2-XS QTof — label-free metabolomics (colon cancer; Cai et al. 2020); also our SDRF fixture.

filesizedownloadviewer
QC01.mzpeak46.7 MBlink▶ View
QC01.mzML81.8 MBlink
README.md903 Blink

🌀 Ion Mobility (IMS) — ims-examples/ (11 datasets, 77 files, 64.3 GB) ​

Provenance. Openly published ion-mobility runs spanning the major IMS technologies — Agilent 6560 drift-tube (DTIMS), Bruker timsTOF trapped-ion mobility (PASEF), and additional PRIDE deposits. Each dataset names its accession and source.

Browse: https://object.storage.eu01.onstackit.cloud/v09/ims.html

ims-examples/PXD052561 ​

PXD052561.

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20231129_CRW_Xevo_015_NM4a_MSe_CE65-75.mzpeak299.7 MBlink▶ View
20231129_NM4_Xevo_MSe.raw.zip573.3 MBlink

ims-examples/PXD059079 ​

PXD059079.

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FAIMS_Ascend_DIA_NCI7_Dilution.zip1.4 GBlink
TimsTOF_HT_NCI7_Dilution.zip16.9 GBlink

ims-examples/PXD076703 ​

PXD076703.

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20240726_HTnew_RSLC_AU25_Leitner_Martinez_MPL_MUW_MPLID24183_s19_98C_C_1_450ng_GD7_1_2095.mzpeak8.7 GBlink▶ View
20240726_HTnew_RSLC_AU25_Leitner_Martinez_MPL_MUW_MPLID24183_s19_98C_C_1_450ng_GD7_1_2095.d.zip9.6 GBlink

ims-examples/PXD077098 ​

PXD077098.

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2024_08_15_Clicia_Milho_A1_B.mzpeak2.0 GBlink▶ View
2024_08_15_Clicia_Milho_A1_B.raw.zip9.7 GBlink

ims-examples/PXD078573 ​

PXD078573.

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20250305_AI_Rui_Xlink_F19_Slot1-28_1_9629.mzpeak1.3 GBlink▶ View
20250305_AI_Rui_Xlink_F19_Slot1-28_1_9629.d.zip1.4 GBlink

ims-examples/PXD079072 ​

PXD079072.

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Xinyi3.mzpeak734.6 MBlink▶ View
Xinyi3.raw1.2 GBlink

ims-examples/PXD079300 ​

PXD079300.

filesizedownloadviewer
25NP03340023_RD8_1_27806.mzpeak2.2 GBlink▶ View
25NP03340023_RD8_1_27806.d.zip2.4 GBlink

ims-examples/PXD079445 ​

PXD079445.

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240617_SAR186_A1_EVs.mzpeak481.7 MBlink▶ View
240617_SAR186_A1_EVs.raw1.3 GBlink

ims-examples/agilent-6560-dtims-imqtof ​

Zenodo 18481720 · Agilent 6560 IM-QTOF — drift-tube ion mobility (DTIMS), CE-MS standard mix.

filesizedownloadviewer
CEMS_10ppm.mzpeak313.8 KBlink▶ View

ims-examples/bruker-timstof-MSV000101607 ​

MassIVE MSV000101607 · Bruker timsTOF Pro — PASEF / TIMS ion mobility (trapped-ion mobility frames).

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Blank(1) Try_Slot1-1_1_8270.mzpeak280.0 MBlink▶ View
Blank_Try.d/Blank(1) Try_Slot1-1_1_8270.d/2026-04-08_00-10-35_Two-column-separation/column_setpoint.txt2.1 MBlink
Blank_Try.d/Blank(1) Try_Slot1-1_1_8270.d/2026-04-08_00-10-35_Two-column-separation/column_temperature.txt2.1 MBlink
Blank_Try.d/Blank(1) Try_Slot1-1_1_8270.d/2026-04-08_00-10-35_Two-column-separation/execution-log_2026-04-08_12-10-31-AM.txt71.6 KBlink
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Blank_Try.d/Blank(1) Try_Slot1-1_1_8270.d/2026-04-08_00-10-35_Two-column-separation/pump-a_pressure.txt455.1 KBlink
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Blank_Try.d/Blank(1) Try_Slot1-1_1_8270.d/2026-04-08_00-10-35_Two-column-separation/pump-a_temperature.txt215.7 KBlink
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Blank_Try.d/Blank(1) Try_Slot1-1_1_8270.d/2026-04-08_00-10-35_Two-column-separation/pump-b_pressure.txt394.8 KBlink
Blank_Try.d/Blank(1) Try_Slot1-1_1_8270.d/2026-04-08_00-10-35_Two-column-separation/pump-b_speed.txt1.9 MBlink
Blank_Try.d/Blank(1) Try_Slot1-1_1_8270.d/2026-04-08_00-10-35_Two-column-separation/pump-b_temperature.txt215.7 KBlink
Blank_Try.d/Blank(1) Try_Slot1-1_1_8270.d/2026-04-08_00-10-35_Two-column-separation/pump-b_volume.txt262.5 KBlink
Blank_Try.d/Blank(1) Try_Slot1-1_1_8270.d/2026-04-08_00-10-35_Two-column-separation/sample-tray_temperature.txt212.2 KBlink
Blank_Try.d/Blank(1) Try_Slot1-1_1_8270.d/2026-04-08_00-10-35_Two-column-separation/setflow-a_setflow.txt1.9 MBlink
Blank_Try.d/Blank(1) Try_Slot1-1_1_8270.d/2026-04-08_00-10-35_Two-column-separation/setflow-b_setflow.txt1.9 MBlink
Blank_Try.d/Blank(1) Try_Slot1-1_1_8270.d/2026-04-08_00-10-35_Two-column-separation/solvent-a_composition.txt2.1 MBlink
Blank_Try.d/Blank(1) Try_Slot1-1_1_8270.d/2026-04-08_00-10-35_Two-column-separation/solvent-b_composition.txt2.1 MBlink
Blank_Try.d/Blank(1) Try_Slot1-1_1_8270.d/2026-04-08_00-10-35_Two-column-separation/system-info_2026-04-08_12-10-31-AM.txt2.3 KBlink
Blank_Try.d/Blank(1) Try_Slot1-1_1_8270.d/2026-04-08_00-10-35_Two-column-separation/system_activity.txt266.7 KBlink
Blank_Try.d/Blank(1) Try_Slot1-1_1_8270.d/2026-04-08_00-10-35_Two-column-separation/valve-a_angle.txt2.1 MBlink
Blank_Try.d/Blank(1) Try_Slot1-1_1_8270.d/2026-04-08_00-10-35_Two-column-separation/valve-b_angle.txt2.2 MBlink
Blank_Try.d/Blank(1) Try_Slot1-1_1_8270.d/2026-04-08_00-10-35_Two-column-separation/valve-i_angle.txt215.8 KBlink
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Blank_Try.d/Blank(1) Try_Slot1-1_1_8270.d/8270.m/backup-2026-04-08.m/diaSettings.diasqlite24.0 KBlink
Blank_Try.d/Blank(1) Try_Slot1-1_1_8270.d/8270.m/backup-2026-04-08.m/hystar.method36.1 KBlink
Blank_Try.d/Blank(1) Try_Slot1-1_1_8270.d/8270.m/backup-2026-04-08.m/lock.file0 Blink
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Blank_Try.d/Blank(1) Try_Slot1-1_1_8270.d/8270.m/backup-2026-04-08.m/microTOFQImpacTemAcquisition.method188.1 KBlink
Blank_Try.d/Blank(1) Try_Slot1-1_1_8270.d/8270.m/backup-2026-04-08.m/prmSettings.prmsqlite36.0 KBlink
Blank_Try.d/Blank(1) Try_Slot1-1_1_8270.d/8270.m/backup-2026-04-08.m/submethods.xml933 Blink
Blank_Try.d/Blank(1) Try_Slot1-1_1_8270.d/8270.m/backup-2026-04-08_1.m/diaSettings.diasqlite24.0 KBlink
Blank_Try.d/Blank(1) Try_Slot1-1_1_8270.d/8270.m/backup-2026-04-08_1.m/hystar.method36.1 KBlink
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Blank_Try.d/Blank(1) Try_Slot1-1_1_8270.d/8270.m/backup-2026-04-08_1.m/microTOFQImpacTemAcquisition.method193.6 KBlink
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Blank_Try.d/Blank(1) Try_Slot1-1_1_8270.d/8270.m/microTOFQImpacTemAcquisition.method192.1 KBlink
Blank_Try.d/Blank(1) Try_Slot1-1_1_8270.d/8270.m/prmSettings.prmsqlite44.0 KBlink
Blank_Try.d/Blank(1) Try_Slot1-1_1_8270.d/8270.m/submethods.xml1001 Blink
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Blank_Try.d/Blank(1) Try_Slot1-1_1_8270.d/analysis.tdf155.7 MBlink
Blank_Try.d/Blank(1) Try_Slot1-1_1_8270.d/analysis.tdf_bin235.4 MBlink
Blank_Try.d/Blank(1) Try_Slot1-1_1_8270.d/chromatography-data-pre.sqlite112.0 KBlink
Blank_Try.d/Blank(1) Try_Slot1-1_1_8270.d/chromatography-data.sqlite1.5 MBlink
Blank_Try.d/Blank(1) Try_Slot1-1_1_8270.d/chromatography-data.sqlite-journal0 Blink
Blank_Try.d/Blank(1) Try_Slot1-1_1_8270.d/desktop.ini140 Blink
Blank_Try.d/Blank(1) Try_Slot1-1_1_8270.d/HyStarMetadata.xml110.6 KBlink
Blank_Try.d/Blank(1) Try_Slot1-1_1_8270.d/SampleInfo.xml4.8 KBlink

ims-examples/bruker-timstof-pro ​

MassIVE MSV000101607 · Bruker timsTOF Pro — PASEF / TIMS ion mobility.

filesizedownloadviewer
raw/SBA415(1) Try_Slot1-2_1_8271.mzpeak2.3 GBlink▶ View
SBA415.mzpeak443.2 MBlink▶ View
SBA415.mzML837.3 MBlink

🔬 Imaging MS (MSI) — imzml-examples/ (8 datasets, 71 files, 4.4 GB) ​

Provenance. PRIDE PXD001283 — the AP-SMALDI mouse urinary-bladder reference (Römpp et al. 2010, Angew. Chem.); the Zenodo 10084132 MSI test suite (DESI colorectal adenoma · LA-ESI Arabidopsis leaf · AP-SMALDI bladder · LTP chilli); Zenodo 18187395 — glioblastoma MALDI phenomics, the multi-optical case (H&E whole-slide + bright-field per section); and the ms-imaging.org Example 1 3×3-pixel pairs (Schramm et al. 2012). All are openly licensed public deposits.

Browse: https://object.storage.eu01.onstackit.cloud/v09/imaging.html

imzml-examples/PXD001283-HR2MSI-urinary-bladder ​

PRIDE PXD001283 · AP-SMALDI 10 µm mouse urinary bladder — the label-free “molecular histology” reference set (Römpp et al. 2010).

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HR2MSImouseurinarybladderS096.mzpeak177.1 MBlink▶ View
HR2MSImouseurinarybladderS096-opticalimage.tif1.5 MBlink
HR2MSImouseurinarybladderS096-results.csv930 Blink
HR2MSImouseurinarybladderS096.ibd777.2 MBlink
HR2MSImouseurinarybladderS096.imzML53.6 MBlink
README.md1.2 KBlink

imzml-examples/example1-continuous ​

ms-imaging.org Example 1 (Schramm et al. 2012) · canonical 3×3-pixel continuous imzML — the smallest valid file.

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Example_Continuous.mzpeak276.2 KBlink▶ View
Example_Continuous.ibd328.1 KBlink
Example_Continuous.imzML22.6 KBlink
README.md846 Blink

imzml-examples/example1-processed ​

ms-imaging.org Example 1 (Schramm et al. 2012) · canonical 3×3-pixel processed imzML.

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Example_Processed.mzpeak276.2 KBlink▶ View
Example_Processed.ibd590.6 KBlink
Example_Processed.imzML22.6 KBlink
README.md838 Blink

imzml-examples/zenodo-18187395-GBM-multimodal ​

Zenodo 18187395 · glioblastoma MALDI phenomics — the multi-optical case: H&E whole-slide (.svs) + bright-field (.tif) per section.

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24_Test_P15_r2/imzml/Test_P15_r2.mzpeak74.5 MBlink▶ View
24_Test_P15_r2/HE-XML/P1_patientset2_102524_104850_aperioID1010549.svs164.6 MBlink
24_Test_P15_r2/HE-XML/P1_patientset2_102524_104850_aperioID1010549.xml1.4 MBlink
24_Test_P15_r2/imzml/Test_P15_r2.embedded-image_0000.tif26.7 MBlink
24_Test_P15_r2/imzml/Test_P15_r2.embedded-image_0001.svs164.6 MBlink
24_Test_P15_r2/imzml/Test_P15_r2.ibd51.9 MBlink
24_Test_P15_r2/imzml/Test_P15_r2.imzML6.6 MBlink
24_Test_P15_r2/Optical/Patientset2_Rep2_0001.tif26.7 MBlink
24_Test_P15_r2/TM/Test_P15_r2.xlsx877.8 KBlink
README.md2.7 KBlink

imzml-examples/zenodo-AP-SMALDI ​

Zenodo 10084132 · AP-SMALDI mouse urinary bladder (same specimen as PXD001283, re-deposited).

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imzML_AP_SMALDI/HR2MSImouseurinarybladderS096.mzpeak177.1 MBlink▶ View
imzML_AP_SMALDI/HR2MSImouseurinarybladderS096-opticalimage.tif1.5 MBlink
imzML_AP_SMALDI/HR2MSImouseurinarybladderS096-results.csv930 Blink
imzML_AP_SMALDI/HR2MSImouseurinarybladderS096.ibd777.2 MBlink
imzML_AP_SMALDI/HR2MSImouseurinarybladderS096.imzML53.6 MBlink
README.md1.2 KBlink

imzml-examples/zenodo-DESI ​

Zenodo 10084132 · DESI imaging of colorectal-adenoma tissue (7 sections / cores).

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imzML_DESI/ColAd_Individual/120TopL, 90TopR, 110BottomL, 100BottomR/120TopL, 90TopR, 110BottomL, 100BottomR-centroid.mzpeak30.9 MBlink▶ View
imzML_DESI/ColAd_Individual/160TopL, 130TopR, 150BottomL, 140BottomR/160TopL,130TopR,150BottomL,140BottomR-centroid.mzpeak24.5 MBlink▶ View
imzML_DESI/ColAd_Individual/200TopL, 170TopR, 190BottomL, 180BottomR/200TopL, 170TopR, 190BottomL, 180BottomR-centroid.mzpeak23.7 MBlink▶ View
imzML_DESI/ColAd_Individual/240TopL, 210TopR, 230BottomL, 220BottomR/240TopL, 210TopR, 230BottomL, 220BottomR-centroid.mzpeak35.8 MBlink▶ View
imzML_DESI/ColAd_Individual/280TopL, 250TopR, 270BottomL, 260BottomR/280TopL, 250TopR, 270BottomL, 260BottomR-centroid.mzpeak37.4 MBlink▶ View
imzML_DESI/ColAd_Individual/40TopL,10TopR,30BottomL,20BottomR/40TopL,10TopR,30BottomL,20BottomR-centroid.mzpeak34.5 MBlink▶ View
imzML_DESI/ColAd_Individual/80TopL, 50TopR, 70BottomL, 60BottomR/80TopL, 50TopR, 70BottomL, 60BottomR-centroid.mzpeak36.5 MBlink▶ View
imzML_DESI/ColAd_Individual/120TopL, 90TopR, 110BottomL, 100BottomR/120TopL, 90TopR, 110BottomL, 100BottomR-centroid.ibd55.7 MBlink
imzML_DESI/ColAd_Individual/120TopL, 90TopR, 110BottomL, 100BottomR/120TopL, 90TopR, 110BottomL, 100BottomR-centroid.imzML28.0 MBlink
imzML_DESI/ColAd_Individual/120TopL, 90TopR, 110BottomL, 100BottomR/90,100,110,120.jpg392.8 KBlink
imzML_DESI/ColAd_Individual/160TopL, 130TopR, 150BottomL, 140BottomR/130,140,150,160.jpg323.1 KBlink
imzML_DESI/ColAd_Individual/160TopL, 130TopR, 150BottomL, 140BottomR/160TopL,130TopR,150BottomL,140BottomR-centroid.ibd42.9 MBlink
imzML_DESI/ColAd_Individual/160TopL, 130TopR, 150BottomL, 140BottomR/160TopL,130TopR,150BottomL,140BottomR-centroid.imzML30.2 MBlink
imzML_DESI/ColAd_Individual/200TopL, 170TopR, 190BottomL, 180BottomR/170,180,190,200.jpg376.6 KBlink
imzML_DESI/ColAd_Individual/200TopL, 170TopR, 190BottomL, 180BottomR/200TopL, 170TopR, 190BottomL, 180BottomR-centroid.ibd41.9 MBlink
imzML_DESI/ColAd_Individual/200TopL, 170TopR, 190BottomL, 180BottomR/200TopL, 170TopR, 190BottomL, 180BottomR-centroid.imzML26.0 MBlink
imzML_DESI/ColAd_Individual/240TopL, 210TopR, 230BottomL, 220BottomR/210,220,230,240.jpg383.2 KBlink
imzML_DESI/ColAd_Individual/240TopL, 210TopR, 230BottomL, 220BottomR/240TopL, 210TopR, 230BottomL, 220BottomR-centroid.ibd65.0 MBlink
imzML_DESI/ColAd_Individual/240TopL, 210TopR, 230BottomL, 220BottomR/240TopL, 210TopR, 230BottomL, 220BottomR-centroid.imzML31.3 MBlink
imzML_DESI/ColAd_Individual/280TopL, 250TopR, 270BottomL, 260BottomR/250,260,270,280.jpg387.3 KBlink
imzML_DESI/ColAd_Individual/280TopL, 250TopR, 270BottomL, 260BottomR/280TopL, 250TopR, 270BottomL, 260BottomR-centroid.ibd68.1 MBlink
imzML_DESI/ColAd_Individual/280TopL, 250TopR, 270BottomL, 260BottomR/280TopL, 250TopR, 270BottomL, 260BottomR-centroid.imzML31.3 MBlink
imzML_DESI/ColAd_Individual/40TopL,10TopR,30BottomL,20BottomR/10,20,30,40.jpg366.2 KBlink
imzML_DESI/ColAd_Individual/40TopL,10TopR,30BottomL,20BottomR/40TopL,10TopR,30BottomL,20BottomR-centroid.ibd63.0 MBlink
imzML_DESI/ColAd_Individual/40TopL,10TopR,30BottomL,20BottomR/40TopL,10TopR,30BottomL,20BottomR-centroid.imzML27.8 MBlink
imzML_DESI/ColAd_Individual/80TopL, 50TopR, 70BottomL, 60BottomR/50,60,70,80.jpg362.2 KBlink
imzML_DESI/ColAd_Individual/80TopL, 50TopR, 70BottomL, 60BottomR/80TopL, 50TopR, 70BottomL, 60BottomR-centroid.ibd66.3 MBlink
imzML_DESI/ColAd_Individual/80TopL, 50TopR, 70BottomL, 60BottomR/80TopL, 50TopR, 70BottomL, 60BottomR-centroid.imzML29.1 MBlink
README.md1.9 KBlink

imzml-examples/zenodo-LA-ESI ​

Zenodo 10084132 · laser-ablation ESI of an Arabidopsis leaf + pre-ablation optical image.

filesizedownloadviewer
imzML_LA-ESI/180817_NEG_Thaliana_Leaf_bottom_1_0841.mzpeak85.4 MBlink▶ View
imzML_LA-ESI/180817_NEG_Thaliana_Leaf_bottom_1_0841.ibd543.9 MBlink
imzML_LA-ESI/180817_NEG_Thaliana_Leaf_bottom_1_0841.imzML2.2 MBlink
imzML_LA-ESI/180817_Thaliana_leaf_bottom_1_0840_preabl_polX30.tif5.6 MBlink
README.md1.0 KBlink

imzml-examples/zenodo-LTP ​

Zenodo 10084132 · low-temperature-plasma (LTP) MSI of a chilli sample.

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imzML_LTP/ltpmsi-chilli.mzpeak151.3 MBlink▶ View
imzML_LTP/130704_IMGCHJ2.jpg288.6 KBlink
imzML_LTP/CHJ2.png350.4 KBlink
imzML_LTP/ltpmsi-chilli.ibd352.7 MBlink
imzML_LTP/ltpmsi-chilli.imzML11.1 MBlink
imzML_LTP/ltpmsi-chilli.imzML.orig-published-checksum11.1 MBlink
README.md2.9 KBlink

🧬 Study Design Embedding — sdrf-examples/ (7 datasets, 505 files, 162.1 GB) ​

Provenance. HUPO-PSI / bigbio community-curated SDRF annotations over PRIDE (PXD009465 · PXD009909 · PXD011799 · PXD014145 · PXD020187) and MetaboLights (MTBLS1129 SDRF · MTBLS5358 native ISA-Tab) studies — label-free plus TMT 6/10/11-plex isobaric designs. The full chain — SDRF/ISA metadata + vendor RAW + mzML + mzPeak — is stored here; each dataset's urls.txt records the original source.

Browse: https://object.storage.eu01.onstackit.cloud/v09/sdrf.html

sdrf-examples/MTBLS1129 ​

MetaboLights MTBLS1129 · label-free metabolomics (Waters Xevo G2-XS; Cai et al. 2020) — clean SDRF↔mzML pair.

filesizedownloadviewer
mzml/QC01.mzpeak46.7 MBlink▶ View
mzml/QC02.mzpeak46.7 MBlink▶ View
mzml/QC03.mzpeak46.6 MBlink▶ View
raw/QC01.mzpeak46.7 MBlink▶ View
MTBLS1129.sdrf.tsv103.9 KBlink
mzml/men_normal_166.mzML81.5 MBlink
mzml/men_normal_2332.mzML82.5 MBlink
mzml/men_normal_2357.mzML82.3 MBlink
mzml/men_normal_2371.mzML82.8 MBlink
mzml/men_normal_2407.mzML82.6 MBlink
mzml/men_normal_2409.mzML82.6 MBlink
mzml/men_normal_2422.mzML82.6 MBlink
mzml/men_normal_2424.mzML82.7 MBlink
mzml/men_normal_2480.mzML83.3 MBlink
mzml/men_normal_2518.mzML82.3 MBlink
mzml/men_normal_2521.mzML82.4 MBlink
mzml/men_normal_2560.mzML82.6 MBlink
mzml/men_normal_2569.mzML83.1 MBlink
mzml/men_normal_2612.mzML83.2 MBlink
mzml/men_normal_2627.mzML82.9 MBlink
mzml/men_normal_2632.mzML83.1 MBlink
mzml/men_normal_2659.mzML83.0 MBlink
mzml/men_normal_2663.mzML82.7 MBlink
mzml/men_normal_2665.mzML83.3 MBlink
mzml/men_normal_2673.mzML83.3 MBlink
mzml/men_normal_2676.mzML83.4 MBlink
mzml/men_normal_2691.mzML83.1 MBlink
mzml/men_normal_2700.mzML82.9 MBlink
mzml/men_normal_363.mzML80.5 MBlink
mzml/men_normal_374.mzML80.8 MBlink
mzml/men_normal_50.mzML81.4 MBlink
mzml/men_normal_6.mzML81.3 MBlink
mzml/menLCCstage1_1122.mzML81.2 MBlink
mzml/menLCCstage1_1532.mzML81.8 MBlink
mzml/menLCCstage1_1941.mzML82.0 MBlink
mzml/menLCCstage1_1969.mzML82.3 MBlink
mzml/menLCCstage1_2516.mzML82.4 MBlink
mzml/menLCCstage1_26.mzML81.4 MBlink
mzml/menLCCstage1_2634.mzML83.1 MBlink
mzml/menLCCstage1_270.mzML81.1 MBlink
mzml/menLCCstage1_507.mzML81.2 MBlink
mzml/menLCCstage1_543.mzML81.7 MBlink
mzml/menLCCstage1_614.mzML81.6 MBlink
mzml/menLCCstage1_679.mzML81.8 MBlink
mzml/menLCCstage1_688.mzML81.6 MBlink
mzml/menLCCstage1_699.mzML81.5 MBlink
mzml/menLCCstage1_755.mzML81.5 MBlink
mzml/menLCCstage2_1011.mzML81.8 MBlink
mzml/menLCCstage2_1063.mzML81.6 MBlink
mzml/menLCCstage2_1333.mzML82.3 MBlink
mzml/menLCCstage2_134.mzML80.7 MBlink
mzml/menLCCstage2_1374.mzML82.4 MBlink
mzml/menLCCstage2_1402.mzML82.6 MBlink
mzml/menLCCstage2_1415.mzML82.2 MBlink
mzml/menLCCstage2_1723.mzML82.0 MBlink
mzml/menLCCstage2_1788.mzML82.0 MBlink
mzml/menLCCstage2_181.mzML81.0 MBlink
mzml/menLCCstage2_1894.mzML82.2 MBlink
mzml/menLCCstage2_203.mzML80.9 MBlink
mzml/menLCCstage2_2070.mzML82.2 MBlink
mzml/menLCCstage2_2247.mzML82.6 MBlink
mzml/menLCCstage2_240.mzML81.7 MBlink
mzml/menLCCstage2_2421.mzML82.6 MBlink
mzml/menLCCstage2_295.mzML80.4 MBlink
mzml/menLCCstage2_373.mzML81.5 MBlink
mzml/menLCCstage2_525.mzML81.6 MBlink
mzml/menLCCstage2_531.mzML81.3 MBlink
mzml/menLCCstage2_625.mzML82.0 MBlink
mzml/menLCCstage2_714.mzML81.2 MBlink
mzml/menLCCstage2_868.mzML81.0 MBlink
mzml/menLCCstage2_893.mzML81.0 MBlink
mzml/menLCCstage2_971.mzML81.7 MBlink
mzml/menLCCstage3_1030.mzML81.0 MBlink
mzml/menLCCstage3_1042.mzML81.3 MBlink
mzml/menLCCstage3_1638.mzML81.4 MBlink
mzml/menLCCstage3_1709.mzML82.4 MBlink
mzml/menLCCstage3_2124.mzML82.3 MBlink
mzml/menLCCstage3_229.mzML81.9 MBlink
mzml/menLCCstage3_2297.mzML82.1 MBlink
mzml/menLCCstage3_2559.mzML82.3 MBlink
mzml/menLCCstage3_258.mzML82.0 MBlink
mzml/menLCCstage3_537.mzML81.9 MBlink
mzml/menLCCstage3_664.mzML81.8 MBlink
mzml/menLCCstage3_67.mzML81.4 MBlink
mzml/menLCCstage3_717.mzML81.5 MBlink
mzml/menLCCstage3_988.mzML81.8 MBlink
mzml/menRCCstage1_1266.mzML82.5 MBlink
mzml/menRCCstage1_1475.mzML83.3 MBlink
mzml/menRCCstage1_1528.mzML82.0 MBlink
mzml/menRCCstage1_1543.mzML82.3 MBlink
mzml/menRCCstage1_1902.mzML82.1 MBlink
mzml/menRCCstage1_2034.mzML82.4 MBlink
mzml/menRCCstage1_2163.mzML82.6 MBlink
mzml/menRCCstage1_2554.mzML82.6 MBlink
mzml/menRCCstage1_2622.mzML83.4 MBlink
mzml/menRCCstage1_47.mzML81.7 MBlink
mzml/menRCCstage2_113.mzML81.5 MBlink
mzml/menRCCstage2_1193.mzML82.3 MBlink
mzml/menRCCstage2_1278.mzML82.3 MBlink
mzml/menRCCstage2_130.mzML81.2 MBlink
mzml/menRCCstage2_1331.mzML82.3 MBlink
mzml/menRCCstage2_1379.mzML82.7 MBlink
mzml/menRCCstage2_1452.mzML82.3 MBlink
mzml/menRCCstage2_1501.mzML81.8 MBlink
mzml/menRCCstage2_2041.mzML82.1 MBlink
mzml/menRCCstage2_2054.mzML81.6 MBlink
mzml/menRCCstage2_2408.mzML82.2 MBlink
mzml/menRCCstage2_2498.mzML82.3 MBlink
mzml/menRCCstage2_2520.mzML82.3 MBlink
mzml/menRCCstage2_2551.mzML82.3 MBlink
mzml/menRCCstage2_2662.mzML83.0 MBlink
mzml/menRCCstage2_2683.mzML83.1 MBlink
mzml/menRCCstage2_329.mzML81.0 MBlink
mzml/menRCCstage2_534.mzML81.3 MBlink
mzml/menRCCstage2_797.mzML81.3 MBlink
mzml/menRCCstage2_810.mzML81.1 MBlink
mzml/menRCCstage2_885.mzML80.8 MBlink
mzml/menRCCstage2_981.mzML81.7 MBlink
mzml/menRCCstage2_991.mzML81.4 MBlink
mzml/menRCCstage3_102.mzML81.3 MBlink
mzml/menRCCstage3_1369.mzML82.3 MBlink
mzml/menRCCstage3_1737.mzML81.8 MBlink
mzml/menRCCstage3_1749.mzML81.8 MBlink
mzml/menRCCstage3_1831.mzML81.1 MBlink
mzml/menRCCstage3_1877.mzML82.3 MBlink
mzml/menRCCstage3_1960.mzML81.6 MBlink
mzml/menRCCstage3_1997.mzML82.1 MBlink
mzml/menRCCstage3_2113.mzML82.6 MBlink
mzml/menRCCstage3_2223.mzML82.6 MBlink
mzml/menRCCstage3_2270.mzML82.6 MBlink
mzml/menRCCstage3_326.mzML81.1 MBlink
mzml/menRCCstage3_546.mzML81.8 MBlink
mzml/menRCCstage3_605.mzML81.6 MBlink
mzml/menRCCstage3_667.mzML81.2 MBlink
mzml/QC01.mzML81.8 MBlink
mzml/QC02.mzML81.8 MBlink
mzml/QC03.mzML81.6 MBlink
mzml/QC04.mzML81.3 MBlink
mzml/QC05.mzML80.8 MBlink
mzml/QC06.mzML81.7 MBlink
mzml/QC07.mzML82.0 MBlink
mzml/QC08.mzML81.8 MBlink
mzml/QC09.mzML81.5 MBlink
mzml/QC10.mzML82.0 MBlink
mzml/QC11.mzML81.6 MBlink
mzml/QC12.mzML82.8 MBlink
mzml/QC13.mzML82.7 MBlink
mzml/QC14.mzML82.8 MBlink
mzml/QC15.mzML82.7 MBlink
mzml/QC16.mzML82.7 MBlink
mzml/QC17.mzML82.4 MBlink
mzml/QC18.mzML82.8 MBlink
mzml/QC19.mzML82.9 MBlink
mzml/QC20.mzML83.1 MBlink
mzml/QC21.mzML83.1 MBlink
mzml/QC22.mzML83.4 MBlink
mzml/QC23.mzML83.1 MBlink
mzml/QC24.mzML83.3 MBlink
mzml/QC25.mzML83.2 MBlink
mzml/QC26.mzML83.3 MBlink
mzml/QC27.mzML83.9 MBlink
mzml/QC28.mzML82.5 MBlink
mzml/urls.txt26.2 KBlink
mzml/women_normal_11.mzML81.3 MBlink
mzml/women_normal_2316.mzML82.3 MBlink
mzml/women_normal_2478.mzML82.3 MBlink
mzml/women_normal_2495.mzML82.4 MBlink
mzml/women_normal_2550.mzML82.6 MBlink
mzml/women_normal_264.mzML81.2 MBlink
mzml/women_normal_2655.mzML82.8 MBlink
mzml/women_normal_2670.mzML83.4 MBlink
mzml/women_normal_2705.mzML83.1 MBlink
mzml/women_normal_4.mzML81.3 MBlink
mzml/women_normal_834.mzML81.3 MBlink
mzml/women_normal_9.mzML81.5 MBlink
mzml/womenLCCstage1_1037.mzML81.5 MBlink
mzml/womenLCCstage1_110.mzML81.2 MBlink
mzml/womenLCCstage1_1221.mzML82.3 MBlink
mzml/womenLCCstage1_1313.mzML82.3 MBlink
mzml/womenLCCstage1_1591.mzML82.0 MBlink
mzml/womenLCCstage1_1858.mzML81.5 MBlink
mzml/womenLCCstage1_2261.mzML82.2 MBlink
mzml/womenLCCstage1_488.mzML81.6 MBlink
mzml/womenLCCstage1_577.mzML81.6 MBlink
mzml/womenLCCstage1_743.mzML81.4 MBlink
mzml/womenLCCstage2_1026.mzML81.9 MBlink
mzml/womenLCCstage2_1029.mzML81.7 MBlink
mzml/womenLCCstage2_1310.mzML82.3 MBlink
mzml/womenLCCstage2_1407.mzML82.6 MBlink
mzml/womenLCCstage2_1427.mzML82.7 MBlink
mzml/womenLCCstage2_146.mzML80.9 MBlink
mzml/womenLCCstage2_1601.mzML82.7 MBlink
mzml/womenLCCstage2_20.mzML81.6 MBlink
mzml/womenLCCstage2_2151.mzML82.9 MBlink
mzml/womenLCCstage2_276.mzML81.0 MBlink
mzml/womenLCCstage2_434.mzML81.2 MBlink
mzml/womenLCCstage2_468.mzML81.4 MBlink
mzml/womenLCCstage2_504.mzML81.5 MBlink
mzml/womenLCCstage2_574.mzML82.0 MBlink
mzml/womenLCCstage2_581.mzML81.9 MBlink
mzml/womenLCCstage2_618.mzML81.5 MBlink
mzml/womenLCCstage2_95.mzML81.2 MBlink
mzml/womenLCCstage3_1097.mzML81.1 MBlink
mzml/womenLCCstage3_1404.mzML82.8 MBlink
mzml/womenLCCstage3_1440.mzML82.4 MBlink
mzml/womenLCCstage3_1631.mzML82.1 MBlink
mzml/womenLCCstage3_1783.mzML82.2 MBlink
mzml/womenLCCstage3_189.mzML81.4 MBlink
mzml/womenLCCstage3_1890.mzML81.9 MBlink
mzml/womenLCCstage3_2105.mzML81.7 MBlink
mzml/womenLCCstage3_2291.mzML82.8 MBlink
mzml/womenLCCstage3_23.mzML81.2 MBlink
mzml/womenLCCstage3_2594.mzML83.1 MBlink
mzml/womenLCCstage3_439.mzML81.8 MBlink
mzml/womenLCCstage3_515.mzML81.1 MBlink
mzml/womenLCCstage3_522.mzML81.5 MBlink
mzml/womenLCCstage3_734.mzML81.5 MBlink
mzml/womenLCCstage3_888.mzML81.4 MBlink
mzml/womenLCCstage3_903.mzML81.3 MBlink
mzml/womenLCCstage3_938.mzML81.8 MBlink
mzml/womenRCCstage1_1617.mzML82.0 MBlink
mzml/womenRCCstage1_1963.mzML82.4 MBlink
mzml/womenRCCstage1_2038.mzML82.6 MBlink
mzml/womenRCCstage1_2202.mzML82.3 MBlink
mzml/womenRCCstage1_2235.mzML82.6 MBlink
mzml/womenRCCstage1_2258.mzML82.3 MBlink
mzml/womenRCCstage1_2600.mzML84.0 MBlink
mzml/womenRCCstage1_2668.mzML83.3 MBlink
mzml/womenRCCstage1_491.mzML81.7 MBlink
mzml/womenRCCstage1_910.mzML81.2 MBlink
mzml/womenRCCstage1_941.mzML82.0 MBlink
mzml/womenRCCstage2_1014.mzML81.3 MBlink
mzml/womenRCCstage2_1190.mzML81.3 MBlink
mzml/womenRCCstage2_1196.mzML82.0 MBlink
mzml/womenRCCstage2_1304.mzML82.8 MBlink
mzml/womenRCCstage2_1514.mzML82.5 MBlink
mzml/womenRCCstage2_1665.mzML82.7 MBlink
mzml/womenRCCstage2_1683.mzML82.3 MBlink
mzml/womenRCCstage2_1728.mzML82.0 MBlink
mzml/womenRCCstage2_1733.mzML81.8 MBlink
mzml/womenRCCstage2_1846.mzML82.1 MBlink
mzml/womenRCCstage2_1937.mzML81.7 MBlink
mzml/womenRCCstage2_1987.mzML82.4 MBlink
mzml/womenRCCstage2_2066.mzML82.1 MBlink
mzml/womenRCCstage2_2479.mzML82.9 MBlink
mzml/womenRCCstage2_261.mzML81.3 MBlink
mzml/womenRCCstage2_2654.mzML83.0 MBlink
mzml/womenRCCstage2_315.mzML80.5 MBlink
mzml/womenRCCstage2_419.mzML80.6 MBlink
mzml/womenRCCstage2_64.mzML81.3 MBlink
mzml/womenRCCstage2_830.mzML81.3 MBlink
mzml/womenRCCstage2_896.mzML80.5 MBlink
mzml/womenRCCstage3_1224.mzML81.9 MBlink
mzml/womenRCCstage3_1237.mzML82.5 MBlink
mzml/womenRCCstage3_1316.mzML82.5 MBlink
mzml/womenRCCstage3_1327.mzML82.4 MBlink
mzml/womenRCCstage3_1363.mzML82.1 MBlink
mzml/womenRCCstage3_1455.mzML82.3 MBlink
mzml/womenRCCstage3_149.mzML81.2 MBlink
mzml/womenRCCstage3_1855.mzML82.7 MBlink
mzml/womenRCCstage3_1924.mzML82.0 MBlink
mzml/womenRCCstage3_2208.mzML82.5 MBlink
mzml/womenRCCstage3_2244.mzML82.2 MBlink
mzml/womenRCCstage3_2303.mzML82.4 MBlink
mzml/womenRCCstage3_2494.mzML82.3 MBlink
mzml/womenRCCstage3_289.mzML80.8 MBlink
mzml/womenRCCstage3_721.mzML81.7 MBlink
mzml/womenRCCstage3_955.mzML81.9 MBlink
mzml/womenRCCstage3_958.mzML81.9 MBlink
mzml/womenRCCstage_1216.mzML82.0 MBlink
raw/menLCCstage1_26.mzML81.4 MBlink
raw/QC01.mzML81.8 MBlink
raw/women_normal_4.mzML81.3 MBlink

sdrf-examples/MTBLS5358 ​

MetaboLights MTBLS5358 · label-free GC-MS oral-cancer metabolomics — native ISA-Tab (i_/s_/a_; Wang et al. 2024).

filesizedownloadviewer
mzml/CTR-1.mzpeak23.7 MBlink▶ View
mzml/CTR-2.mzpeak23.7 MBlink▶ View
mzml/CTR-3.mzpeak23.7 MBlink▶ View
raw/CTR-1.mzpeak24.0 MBlink▶ View
raw/CTR-2.mzpeak24.0 MBlink▶ View
raw/CTR-3.mzpeak24.0 MBlink▶ View
a_MTBLS5358_GC-MS_positive__metabolite_profiling.txt13.1 KBlink
i_Investigation.txt11.0 KBlink
mzml/CTR-1.mzML62.6 MBlink
mzml/CTR-2.mzML62.6 MBlink
mzml/CTR-3.mzML62.5 MBlink
mzml/CTR-4.mzML62.5 MBlink
mzml/CTR-5.mzML62.2 MBlink
mzml/G-1.mzML62.5 MBlink
mzml/G-2.mzML62.6 MBlink
mzml/G-3.mzML62.6 MBlink
mzml/G-4.mzML62.6 MBlink
mzml/G-5.mzML62.6 MBlink
mzml/G-Era-1.mzML62.6 MBlink
mzml/G-Era-2.mzML62.5 MBlink
mzml/G-Era-3.mzML62.4 MBlink
mzml/G-Era-4.mzML62.6 MBlink
mzml/G-Era-5.mzML62.6 MBlink
mzml/QC-1.mzML62.5 MBlink
mzml/QC-2.mzML62.5 MBlink
mzml/QC-3.mzML62.6 MBlink
mzml/QC-4.mzML62.6 MBlink
mzml/urls.txt0 Blink
raw/CTR-1.raw32.7 MBlink
raw/CTR-2.raw32.7 MBlink
raw/CTR-3.raw32.7 MBlink
raw/CTR-4.raw32.7 MBlink
raw/CTR-5.raw32.5 MBlink
raw/G-1.raw32.7 MBlink
raw/G-2.raw32.7 MBlink
raw/G-3.raw32.7 MBlink
raw/G-4.raw32.7 MBlink
raw/G-5.raw32.7 MBlink
raw/G-Era-1.raw32.7 MBlink
raw/G-Era-2.raw32.7 MBlink
raw/G-Era-3.raw32.6 MBlink
raw/G-Era-4.raw32.7 MBlink
raw/G-Era-5.raw32.7 MBlink
raw/QC-1.raw32.7 MBlink
raw/QC-2.raw32.7 MBlink
raw/QC-3.raw32.7 MBlink
raw/QC-4.raw32.7 MBlink
raw/urls.txt1.9 KBlink
s_MTBLS5358.txt4.9 KBlink

sdrf-examples/PXD009465 ​

PRIDE PXD009465 · TMT 6-plex Plasmodium falciparum PfPK7 phosphoproteome (LTQ Orbitrap Velos; Pease et al. 2018).

filesizedownloadviewer
mzml/t04175_EH_Malaria_WT_PK7_KO_Phos_SCX1.mzpeak43.7 MBlink▶ View
mzml/t04176_EH_Malaria_WT_PK7_KO_Phos_SCX2.mzpeak46.9 MBlink▶ View
mzml/t04177_EH_Malaria_WT_PK7_KO_Phos_SCX3.mzpeak43.7 MBlink▶ View
raw/t04175_EH_Malaria_WT_PK7_KO_Phos_SCX1.mzpeak50.8 MBlink▶ View
raw/t04176_EH_Malaria_WT_PK7_KO_Phos_SCX2.mzpeak53.9 MBlink▶ View
raw/t04177_EH_Malaria_WT_PK7_KO_Phos_SCX3.mzpeak50.7 MBlink▶ View
mzml/t04175_EH_Malaria_WT_PK7_KO_Phos_SCX1.mzML174.4 MBlink
mzml/t04176_EH_Malaria_WT_PK7_KO_Phos_SCX2.mzML159.6 MBlink
mzml/t04177_EH_Malaria_WT_PK7_KO_Phos_SCX3.mzML166.5 MBlink
mzml/t04178_EH_Malaria_WT_PK7_KO_Phos_SCX4.mzML173.9 MBlink
mzml/t04179_EH_Malaria_WT_PK7_KO_Phos_SCX5.mzML170.6 MBlink
mzml/t04181_EH_Malaria_WT_PK7_KO_Phos_SCX6.mzML177.5 MBlink
mzml/t04182_EH_Malaria_WT_PK7_KO_Phos_SCX7.mzML190.2 MBlink
mzml/t04183_EH_Malaria_WT_PK7_KO_Phos_SCX8.mzML178.8 MBlink
mzml/t04184_EH_Malaria_WT_PK7_KO_Phos_SCX9.mzML177.7 MBlink
mzml/t04185_EH_Malaria_WT_PK7_KO_Phos_SCX10.mzML231.9 MBlink
mzml/urls.txt0 Blink
PXD009465.sdrf.tsv41.4 KBlink
raw/t04175_EH_Malaria_WT_PK7_KO_Phos_SCX1.RAW125.0 MBlink
raw/t04176_EH_Malaria_WT_PK7_KO_Phos_SCX2.RAW132.8 MBlink
raw/t04177_EH_Malaria_WT_PK7_KO_Phos_SCX3.RAW125.6 MBlink
raw/t04178_EH_Malaria_WT_PK7_KO_Phos_SCX4.RAW135.0 MBlink
raw/t04179_EH_Malaria_WT_PK7_KO_Phos_SCX5.RAW141.1 MBlink
raw/t04181_EH_Malaria_WT_PK7_KO_Phos_SCX6.RAW157.0 MBlink
raw/t04182_EH_Malaria_WT_PK7_KO_Phos_SCX7.RAW151.9 MBlink
raw/t04183_EH_Malaria_WT_PK7_KO_Phos_SCX8.RAW152.7 MBlink
raw/t04184_EH_Malaria_WT_PK7_KO_Phos_SCX9.RAW140.2 MBlink
raw/t04185_EH_Malaria_WT_PK7_KO_Phos_SCX10.RAW217.2 MBlink
raw/urls.txt1.0 KBlink

sdrf-examples/PXD009909 ​

PRIDE PXD009909 · label-free mouse retina proteome (Orbitrap Fusion; Harman et al. 2018).

filesizedownloadviewer
mzml/70JG_01.mzpeak535.1 MBlink▶ View
mzml/70JG_02.mzpeak591.8 MBlink▶ View
mzml/70JG_03.mzpeak543.0 MBlink▶ View
raw/70JG_01.mzpeak483.6 MBlink▶ View
raw/70JG_02.mzpeak537.9 MBlink▶ View
raw/70JG_03.mzpeak495.3 MBlink▶ View
mzml/70JG_01.mzML2.1 GBlink
mzml/70JG_02.mzML2.4 GBlink
mzml/70JG_03.mzML2.2 GBlink
mzml/70JG_04.mzML2.1 GBlink
mzml/70JG_05.mzML2.1 GBlink
mzml/70JG_06.mzML2.0 GBlink
mzml/70JG_07.mzML2.0 GBlink
mzml/70JG_08.mzML1.9 GBlink
mzml/70JG_09.mzML1.8 GBlink
mzml/70JG_10.mzML2.0 GBlink
mzml/70JG_11.mzML1.9 GBlink
mzml/70JG_12.mzML1.7 GBlink
mzml/70JG_mouse-1.mzML2.2 GBlink
mzml/urls.txt83 Blink
PXD009909.sdrf.tsv6.6 KBlink
raw/70JG_01.raw832.2 MBlink
raw/70JG_02.raw953.8 MBlink
raw/70JG_03.raw919.0 MBlink
raw/70JG_04.raw877.1 MBlink
raw/70JG_05.raw870.2 MBlink
raw/70JG_06.raw839.5 MBlink
raw/70JG_07.raw822.4 MBlink
raw/70JG_08.raw769.1 MBlink
raw/70JG_09.raw717.9 MBlink
raw/70JG_10.raw804.0 MBlink
raw/70JG_11.raw746.6 MBlink
raw/70JG_12.raw679.0 MBlink
raw/urls.txt924 Blink

sdrf-examples/PXD011799 ​

PRIDE PXD011799 · TMT 10-plex melanoma B cells (Orbitrap Fusion Lumos; Griss et al. 2019) — the TMT channel-model fixture.

filesizedownloadviewer
mzml/20170131_Lumos_RSLC4_Maurer_Hartl_UW_MFPL_Global_TMT_fr10_MS2.mzpeak464.4 MBlink▶ View
mzml/20170131_Lumos_RSLC4_Maurer_Hartl_UW_MFPL_Global_TMT_fr11_MS2.mzpeak460.4 MBlink▶ View
mzml/20170131_Lumos_RSLC4_Maurer_Hartl_UW_MFPL_Global_TMT_fr1_MS2.mzpeak394.3 MBlink▶ View
raw/20170131_Lumos_RSLC4_Maurer_Hartl_UW_MFPL_Global_TMT_fr10_MS2.mzpeak427.1 MBlink▶ View
raw/20170131_Lumos_RSLC4_Maurer_Hartl_UW_MFPL_Global_TMT_fr11_MS2.mzpeak423.8 MBlink▶ View
raw/20170131_Lumos_RSLC4_Maurer_Hartl_UW_MFPL_Global_TMT_fr1_MS2.mzpeak363.6 MBlink▶ View
mzml/20170131_Lumos_RSLC4_Maurer_Hartl_UW_MFPL_Global_TMT_fr10_MS2.mzML1.8 GBlink
mzml/20170131_Lumos_RSLC4_Maurer_Hartl_UW_MFPL_Global_TMT_fr11_MS2.mzML1.8 GBlink
mzml/20170131_Lumos_RSLC4_Maurer_Hartl_UW_MFPL_Global_TMT_fr1_MS2.mzML1.5 GBlink
mzml/20170131_Lumos_RSLC4_Maurer_Hartl_UW_MFPL_Global_TMT_fr2_MS2.mzML1.8 GBlink
mzml/20170131_Lumos_RSLC4_Maurer_Hartl_UW_MFPL_Global_TMT_fr3_MS2.mzML1.8 GBlink
mzml/20170131_Lumos_RSLC4_Maurer_Hartl_UW_MFPL_Global_TMT_fr4_Ms2.mzML1.8 GBlink
mzml/20170131_Lumos_RSLC4_Maurer_Hartl_UW_MFPL_Global_TMT_fr5_MS2.mzML1.8 GBlink
mzml/20170131_Lumos_RSLC4_Maurer_Hartl_UW_MFPL_Global_TMT_fr6_MS2.mzML1.8 GBlink
mzml/20170131_Lumos_RSLC4_Maurer_Hartl_UW_MFPL_Global_TMT_fr7_MS2.mzML1.8 GBlink
mzml/20170131_Lumos_RSLC4_Maurer_Hartl_UW_MFPL_Global_TMT_fr9_MS2.mzML1.8 GBlink
mzml/20170131_Lumos_RSLC4_Maurer_Hartl_UW_MFPL_TiO2_TMT_fr1.mzML1.2 GBlink
mzml/20170131_Lumos_RSLC4_Maurer_Hartl_UW_MFPL_TiO2_TMT_fr10.mzML271.4 MBlink
mzml/20170131_Lumos_RSLC4_Maurer_Hartl_UW_MFPL_TiO2_TMT_fr11.mzML1.8 GBlink
mzml/20170131_Lumos_RSLC4_Maurer_Hartl_UW_MFPL_TiO2_TMT_fr8.mzML276.8 MBlink
mzml/20170131_Lumos_RSLC4_Maurer_Hartl_UW_MFPL_TiO2_TMT_fr9.mzML270.0 MBlink
mzml/20170424_Lumos_RSLC3_Maurer_Hartl_UW_MFPL_shotgun_TMT1_global_Fr1.mzML1.4 GBlink
mzml/20170424_Lumos_RSLC3_Maurer_Hartl_UW_MFPL_shotgun_TMT1_global_Fr10.mzML1.4 GBlink
mzml/20170424_Lumos_RSLC3_Maurer_Hartl_UW_MFPL_shotgun_TMT1_global_Fr2.mzML1.4 GBlink
mzml/20170424_Lumos_RSLC3_Maurer_Hartl_UW_MFPL_shotgun_TMT1_global_Fr7.mzML1.4 GBlink
mzml/20170424_Lumos_RSLC3_Maurer_Hartl_UW_MFPL_shotgun_TMT1_global_Fr8.mzML1.4 GBlink
mzml/20170424_Lumos_RSLC3_Maurer_Hartl_UW_MFPL_shotgun_TMT1_global_Fr9.mzML1.4 GBlink
mzml/20170424_Lumos_RSLC3_Maurer_Hartl_UW_MFPL_shotgun_TMT1_TiO2_Fr12.mzML1.6 GBlink
mzml/20170424_Lumos_RSLC3_Maurer_Hartl_UW_MFPL_shotgun_TMT1_TiO2_Fr2.mzML1.1 GBlink
mzml/20170424_Lumos_RSLC3_Maurer_Hartl_UW_MFPL_shotgun_TMT1_TiO2_Fr7.mzML1.3 GBlink
mzml/20170424_Lumos_RSLC3_Maurer_Hartl_UW_MFPL_shotgun_TMT1_TiO2_Fr9.mzML1.3 GBlink
mzml/urls.txt376 Blink
PXD011799.sdrf.tsv396.5 KBlink
raw/20170131_Lumos_RSLC4_Maurer_Hartl_UW_MFPL_Global_TMT_fr10_MS2.raw722.9 MBlink
raw/20170131_Lumos_RSLC4_Maurer_Hartl_UW_MFPL_Global_TMT_fr11_MS2.raw718.2 MBlink
raw/20170131_Lumos_RSLC4_Maurer_Hartl_UW_MFPL_Global_TMT_fr1_MS2.raw624.3 MBlink
raw/20170131_Lumos_RSLC4_Maurer_Hartl_UW_MFPL_Global_TMT_fr2_MS2.raw716.2 MBlink
raw/20170131_Lumos_RSLC4_Maurer_Hartl_UW_MFPL_Global_TMT_fr3_MS2.raw728.3 MBlink
raw/20170131_Lumos_RSLC4_Maurer_Hartl_UW_MFPL_Global_TMT_fr4_Ms2.raw718.3 MBlink
raw/20170131_Lumos_RSLC4_Maurer_Hartl_UW_MFPL_Global_TMT_fr5_MS2.raw719.5 MBlink
raw/20170131_Lumos_RSLC4_Maurer_Hartl_UW_MFPL_Global_TMT_fr6_MS2.raw723.3 MBlink
raw/20170131_Lumos_RSLC4_Maurer_Hartl_UW_MFPL_Global_TMT_fr7_MS2.raw715.3 MBlink
raw/20170131_Lumos_RSLC4_Maurer_Hartl_UW_MFPL_Global_TMT_fr9_MS2.raw722.9 MBlink
raw/20170131_Lumos_RSLC4_Maurer_Hartl_UW_MFPL_TiO2_TMT_fr1.raw569.6 MBlink
raw/20170131_Lumos_RSLC4_Maurer_Hartl_UW_MFPL_TiO2_TMT_fr11.raw690.2 MBlink
raw/20170131_Lumos_RSLC4_Maurer_Hartl_UW_MFPL_TiO2_TMT_fr8.raw615.9 MBlink
raw/20170131_Lumos_RSLC4_Maurer_Hartl_UW_MFPL_TiO2_TMT_fr9.raw681.3 MBlink
raw/20170424_Lumos_RSLC3_Maurer_Hartl_UW_MFPL_shotgun_TMT1_global_Fr1.raw603.5 MBlink
raw/20170424_Lumos_RSLC3_Maurer_Hartl_UW_MFPL_shotgun_TMT1_global_Fr10.raw603.3 MBlink
raw/20170424_Lumos_RSLC3_Maurer_Hartl_UW_MFPL_shotgun_TMT1_global_Fr2.raw624.7 MBlink
raw/20170424_Lumos_RSLC3_Maurer_Hartl_UW_MFPL_shotgun_TMT1_global_Fr7.raw595.2 MBlink
raw/20170424_Lumos_RSLC3_Maurer_Hartl_UW_MFPL_shotgun_TMT1_global_Fr8.raw601.6 MBlink
raw/20170424_Lumos_RSLC3_Maurer_Hartl_UW_MFPL_shotgun_TMT1_global_Fr9.raw602.7 MBlink
raw/20170424_Lumos_RSLC3_Maurer_Hartl_UW_MFPL_shotgun_TMT1_TiO2_Fr12.raw608.9 MBlink
raw/20170424_Lumos_RSLC3_Maurer_Hartl_UW_MFPL_shotgun_TMT1_TiO2_Fr2.raw460.8 MBlink
raw/20170424_Lumos_RSLC3_Maurer_Hartl_UW_MFPL_shotgun_TMT1_TiO2_Fr7.raw508.4 MBlink
raw/20170424_Lumos_RSLC3_Maurer_Hartl_UW_MFPL_shotgun_TMT1_TiO2_Fr9.raw492.1 MBlink
raw/urls.txt3.1 KBlink

sdrf-examples/PXD014145 ​

PRIDE PXD014145 · TMT 11-plex KMT9 lung cancer (Q Exactive; Baumert et al. 2020).

filesizedownloadviewer
mzml/MFA380.mzpeak321.9 MBlink▶ View
mzml/MFA381.mzpeak318.8 MBlink▶ View
mzml/MFA382.mzpeak323.9 MBlink▶ View
raw/MFA380.mzpeak299.8 MBlink▶ View
raw/MFA381.mzpeak296.9 MBlink▶ View
raw/MFA382.mzpeak301.8 MBlink▶ View
mzml/MFA380.mzML1.2 GBlink
mzml/MFA381.mzML1.2 GBlink
mzml/MFA382.mzML1.2 GBlink
mzml/MFA383.mzML1.3 GBlink
mzml/MFA384.mzML1.3 GBlink
mzml/MFA385.mzML1.3 GBlink
mzml/MFA386.mzML1.2 GBlink
mzml/MFA387.mzML1.3 GBlink
mzml/MFA388.mzML1.3 GBlink
mzml/MFA389.mzML1.3 GBlink
mzml/MFA390.mzML1.2 GBlink
mzml/MFA391.mzML1.3 GBlink
mzml/urls.txt0 Blink
PXD014145.sdrf.tsv88.5 KBlink
raw/MFA380.raw523.5 MBlink
raw/MFA381.raw517.9 MBlink
raw/MFA382.raw526.4 MBlink
raw/MFA383.raw543.1 MBlink
raw/MFA384.raw554.3 MBlink
raw/MFA385.raw554.5 MBlink
raw/MFA386.raw553.0 MBlink
raw/MFA387.raw567.0 MBlink
raw/MFA388.raw559.4 MBlink
raw/MFA389.raw550.9 MBlink
raw/MFA390.raw541.9 MBlink
raw/MFA391.raw553.8 MBlink
raw/urls.txt912 Blink

sdrf-examples/PXD020187 ​

PRIDE PXD020187 · label-free decellularized umbilical artery (LTQ Orbitrap Elite; Mallis et al. 2020).

filesizedownloadviewer
mzml/D1_Nat_1.mzpeak313.3 MBlink▶ View
mzml/D2_Nat_2.mzpeak309.4 MBlink▶ View
mzml/D3_Nat_3.mzpeak314.6 MBlink▶ View
raw/D1_Nat_1.mzpeak297.0 MBlink▶ View
raw/D2_Nat_2.mzpeak292.3 MBlink▶ View
raw/D3_Nat_3.mzpeak298.2 MBlink▶ View
mzml/D1_Nat_1.mzML1.2 GBlink
mzml/D2_Nat_2.mzML1.2 GBlink
mzml/D3_Nat_3.mzML1.2 GBlink
mzml/D4_Nat_4.mzML1.3 GBlink
mzml/D5_Nat_5.mzML1.3 GBlink
mzml/E1_Dec_1.mzML1.2 GBlink
mzml/E2_Dec_2.mzML1.3 GBlink
mzml/E3_Dec_3.mzML1.3 GBlink
mzml/E4_Dec_4.mzML1.3 GBlink
mzml/E5_Dec_5.mzML1.3 GBlink
mzml/urls.txt0 Blink
PXD020187.sdrf.tsv6.4 KBlink
raw/D1_Nat_1.raw581.5 MBlink
raw/D2_Nat_2.raw578.0 MBlink
raw/D3_Nat_3.raw582.2 MBlink
raw/D4_Nat_4.raw608.6 MBlink
raw/D5_Nat_5.raw587.2 MBlink
raw/E1_Dec_1.raw575.9 MBlink
raw/E2_Dec_2.raw606.8 MBlink
raw/E3_Dec_3.raw615.6 MBlink
raw/E4_Dec_4.raw584.1 MBlink
raw/E5_Dec_5.raw619.2 MBlink
raw/urls.txt780 Blink

📏 TOF Grid-Profile — tof-grid-examples/ (5 datasets, 17 files, 10.3 GB) ​

Provenance. QTOF runs acquired in SWATH/DIA (grid/window) mode, the 2-D m/z × scan structure the grid encoding targets. SCIEX TripleTOF 6600 SWATH from PRIDE (PXD071869 · PXD011326) and MassIVE (MSV000090684 · MSV000090136 · MSV000093587). Each dataset names its accession; all are openly licensed public deposits.

Browse: https://object.storage.eu01.onstackit.cloud/v09/tof-grid.html

tof-grid-examples/MSV000090684 ​

SCIEX TripleTOF 6600 BioID-SWATH (~5.4 GB)

filesizedownloadviewer
9611_NSMF_CBF_BR1_BioID_20180119_TOF6600_AS13_SWATH.mzpeak706.8 MBlink▶ View
9611_NSMF_CBF_BR1_BioID_20180119_TOF6600_AS13_SWATH.wiff5.6 MBlink
9611_NSMF_CBF_BR1_BioID_20180119_TOF6600_AS13_SWATH.wiff.scan1.0 GBlink

tof-grid-examples/MSV000093587 ​

TripleTOF SWATH

filesizedownloadviewer
Sample002.mzpeak719.8 MBlink▶ View
Sample002.wiff16.9 MBlink
Sample002.wiff.scan1.0 GBlink

tof-grid-examples/MSV000095995 ​

SCIEX ZenoTOF 7600 top-down RNase B, MRM-HR (.wiff+.wiff.scan+.wiff2 from raw/); native SCIEX reader produces the uniform-m/z TOF grid

filesizedownloadviewer
20240826_RNAseB_Reduced_50ngul_1ul_MRM_03.mzpeak48.0 MBlink▶ View
20240826_RNAseB_Reduced_50ngul_1ul_MRM_03.wiff2.1 MBlink
20240826_RNAseB_Reduced_50ngul_1ul_MRM_03.wiff.scan69.0 MBlink
20240826_RNAseB_Reduced_50ngul_1ul_MRM_03.wiff22.4 MBlink

tof-grid-examples/PXD011326 ​

SCIEX TripleTOF 6600 SWATH (two-file)

filesizedownloadviewer
VD_170826_SWATH_6600_PD_01.mzpeak1.0 GBlink▶ View
VD_170826_SWATH_6600_PD_01.wiff12.5 MBlink
VD_170826_SWATH_6600_PD_01.wiff.scan1.6 GBlink

tof-grid-examples/PXD071869 ​

SCIEX TripleTOF 6600 dual-window SWATH (wiff+scan+wiff2)

filesizedownloadviewer
08_SWATH_1E_1H.mzpeak1.8 GBlink▶ View
08_SWATH_1E_1H.wiff15.2 MBlink
08_SWATH_1E_1H.wiff.scan2.2 GBlink
08_SWATH_1E_1H.wiff240.7 MBlink

An open HUPO-PSI community format.

© 2026 the mzPeak contributors